Merged in origin-hub (pull request thermohub#63)

sync with Origin hub

.github/workflows/draft-pdf.yml

@@ -0,0 +1,23 @@
+on: [push]
+
+jobs:
+  paper:
+    runs-on: ubuntu-latest
+    name: Paper Draft
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v2
+      - name: Build draft PDF
+        uses: openjournals/openjournals-draft-action@master
+        with:
+          journal: joss
+          # This should be the path to the paper within your repo.
+          paper-path: paper/paper.md
+      - name: Upload
+        uses: actions/upload-artifact@v1
+        with:
+          name: paper
+          # This is the output path where Pandoc will write the compiled
+          # PDF. Note, this should be the same directory as the input
+          # paper.md
+          path: paper/paper.pdf

.github/workflows/linux.yml

@@ -23,7 +23,7 @@ jobs:
         config: ["Release"]
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Timestamp  # Idea from https://tinyurl.com/47wz7vpv
         id: timestamp
@@ -34,7 +34,7 @@ jobs:
 
       - name: Configuring Cache
         id: cache
-        uses: actions/cache@v2
+        uses: actions/cache@v3
         with:
           path: |
             /home/runner/.cache
@@ -50,7 +50,6 @@ jobs:
           python-version: ${{ matrix.python-version }}
           channels: conda-forge
           channel-priority: true
-          use-only-tar-bz2: true  # IMPORTANT: This needs to be set true for caching of miniconda packages to work properly!
 
       - name: Configuring Conda Environment
         shell: bash -l {0}

.github/workflows/osx.yml

@@ -23,7 +23,7 @@ jobs:
         config: ["Release"]
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Timestamp  # Idea from https://tinyurl.com/47wz7vpv
         id: timestamp
@@ -34,7 +34,7 @@ jobs:
 
       - name: Configuring Cache
         id: cache
-        uses: actions/cache@v2
+        uses: actions/cache@v3
         with:
           path: |
             /Users/runner/Library/Caches/ccache
@@ -50,7 +50,6 @@ jobs:
           python-version: ${{ matrix.python-version }}
           channels: conda-forge
           channel-priority: true
-          use-only-tar-bz2: true  # IMPORTANT: This needs to be set true for caching of miniconda packages to work properly!
 
       - name: Configuring Conda Environment
         shell: bash -l {0}

.github/workflows/windows.yml

@@ -24,7 +24,7 @@ jobs:
         config: ["Release"]
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Timestamp  # Idea from https://tinyurl.com/47wz7vpv
         id: timestamp
@@ -35,7 +35,7 @@ jobs:
 
       - name: Configuring Cache
         id: cache
-        uses: actions/cache@v2
+        uses: actions/cache@v3
         with:
           path: |
             C:\Users\runneradmin\clcache
@@ -52,7 +52,6 @@ jobs:
           activate-environment: ''
           channels: conda-forge
           channel-priority: true
-          use-only-tar-bz2: true  # IMPORTANT: This needs to be set true for caching of miniconda packages to work properly!
 
       - name: Configuring Conda Environment
         env:

.hdoc.toml

@@ -0,0 +1,32 @@
+[project]
+name = "thermofun"
+version = "0.4.2"
+
+# Optional, adding this will enable direct links from the documentation
+# to your source code.
+git_repo_url = "https://github.com/thermohub/thermofun/"
+git_default_branch = "master"
+
+[paths]
+compile_commands = "build/compile_commands.json"
+# output_dir = "docs/hdoc-output"
+
+[pages]
+homepage = "docs/index.md"
+
+[ignore]
+# Symbols from any of the following path fragments will be ignored
+ignore_private_members = true
+paths = [
+  "/python/",
+  "/pytests/",
+  "/tests/",
+  "/Common/",
+  "OptimizationUtils.h",
+  "/Substances/Solvent/Reaktoro/",
+  "/Substances/Gases/s_solmod_.cpp",
+  "/Substances/Gases/s_solmod_.h",
+  "/Substances/Gases/s_solmod2_.cpp",
+  "/Substances/Gases/verror.h"
+  # more paths can be added as needed
+]

CMakeLists.txt

@@ -2,7 +2,7 @@
 cmake_minimum_required(VERSION 3.9)
 
 # Set the name of the project
-project(ThermoFun VERSION 0.4.0 LANGUAGES CXX)
+project(ThermoFun VERSION 0.4.3 LANGUAGES CXX)
 
 # Set the cmake module path of the project
 set(CMAKE_MODULE_PATH "${CMAKE_CURRENT_SOURCE_DIR}/cmake/modules")