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Array of nans when running scglue.models.fit_SCGLUE #123

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sanikadeshmukh3 opened this issue Aug 11, 2024 · 2 comments
Open

Array of nans when running scglue.models.fit_SCGLUE #123

sanikadeshmukh3 opened this issue Aug 11, 2024 · 2 comments

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@sanikadeshmukh3
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This is what I'm seeing. I made sure to get rid of all NaNs where I could find them but I think it may be a problem with how I configured the dataset.

Screenshot 2024-08-10 at 11 46 28 PM
@PelenJiang
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I have the same problem, do you solve it?

@HelloWorldLTY
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Hi, you can try to use gradient_clip in the optimization process or adjust the batch size to avoid the problem. This should be caused by numerical problems.

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