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  1. scgs-somy scgs-somy Public

    Scripts used to calculate somies from single-cells using scCNV data.

    R

  2. flowchartMaker flowchartMaker Public

    A simple R script that uses the visNetwork package to create an interactive flow chart.

    HTML

  3. scRNA_aneuploidy scRNA_aneuploidy Public

    A script to distinguish leishmania cells with highly aneuploid karyotypes from cells with baseline aneuploidy.

    R

  4. LeishBarSeqAndAneuploidy LeishBarSeqAndAneuploidy Public

    This repository contains custom scripts used in the data analysis of the paper entitled "The role of aneuploidy and polyclonality in the adaptation of the Protozoan parasite Leishmania to high drug…

    R

  5. GO_tools GO_tools Public

    A collection of simple R functions that are designed to assist GO enrichment analysis pipelines.

    R