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improve quality control for coregistration, segmentation and meshing of EEG head model #633

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robertoostenveld opened this issue Jan 19, 2023 · 2 comments
Open

improve quality control for coregistration, segmentation and meshing of EEG head model #633

robertoostenveld opened this issue Jan 19, 2023 · 2 comments

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@robertoostenveld
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as discussed with @canoni and @mcpiastra
 
The figure 2 in the EEG BEM headmodel tutorial should be redone and include the plotting after reading, segmenting and meshing. Looking at the mesh after the headmodel is constructed is too late.

Furthermore, the tutorial should include the actual figures and it should point to FAQs that explain what to do if something is not as it should be.

We should also consider including the estimated segmentation volumes in the QA.
@robertoostenveld
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to update the figure, I will make a new version of it in the google slide presentation with all FT website figures (JM and MC know where that is).

robertoostenveld added a commit that referenced this issue Jan 24, 2023
@robertoostenveld
trying to address #633
58f6285 
- I have made  a first pass over the headmodel_eeg_bem tutorial
- I updated some of the FAQs
- I updated the pipeline figures and added plotting at every step
- the plotting is not yet explicitly documented in the EEG BEM tutorial itself
- I also renamed (also on the download server) the folders with the tutorial data
@robertoostenveld robertoostenveld mentioned this issue Jan 27, 2023
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robertoostenveld added a commit that referenced this issue Jan 30, 2023
@robertoostenveld
rewrite of tutorial to improve the segmentation and meshing quality c…
2d7b7f0 
…ontrol , see #633

- the figures should still be updated
@robertoostenveld
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It would be good to improve the organization of the quality control documentation. As identified by @canoni in #2168, we already have some pages on this:

@robertoostenveld robertoostenveld changed the title improve QA diagnostics in EEG BEM headmodel and point to solutions for common problems improve quality control for segmentation and meshing of EEG head model Jan 30, 2023
@robertoostenveld robertoostenveld changed the title improve quality control for segmentation and meshing of EEG head model improve quality control for coregistration, segmentation and meshing of EEG head model Jan 30, 2023
robertoostenveld added a commit that referenced this issue Feb 6, 2023
@robertoostenveld
updated and added figures to the BEM EEG tutorial, see #633
a393090
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