Fix duplicate update infra

[felixwang9817]

What this PR does / why we need it: This PR removes the duplicate update_infra call in feast apply. It also cleans up apply_total, by ensuring that entities and ODFVs are also being deleted.

Which issue(s) this PR fixes:

Fixes #1795

Does this PR introduce a user-facing change?:

feast apply only calls update_infra once

[felixwang9817]

/kind bug

[codecov-commenter]

Codecov Report

Merging #1990 (a9d57f9) into master (3e42fb3) will decrease coverage by 23.12%.
The diff coverage is 58.33%.

@@             Coverage Diff             @@
##           master    #1990       +/-   ##
===========================================
- Coverage   82.08%   58.95%   -23.13%     
===========================================
  Files         100      100               
  Lines        7992     8072       +80     
===========================================
- Hits         6560     4759     -1801     
- Misses       1432     3313     +1881     

Flag	Coverage Δ
integrationtests	?
unittests	58.95% <58.33%> (-0.36%)	⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files	Coverage Δ
sdk/python/feast/repo_operations.py	42.80% <0.00%> (-1.03%)	⬇️
sdk/python/feast/registry.py	67.48% <90.00%> (-12.96%)	⬇️
sdk/python/feast/feature_store.py	72.58% <100.00%> (-18.74%)	⬇️
...on/tests/integration/registration/test_registry.py	69.91% <100.00%> (-30.09%)	⬇️
.../integration/online_store/test_universal_online.py	13.90% <0.00%> (-85.43%)	⬇️
.../integration/online_store/test_online_retrieval.py	17.39% <0.00%> (-82.61%)	⬇️
...fline_store/test_universal_historical_retrieval.py	19.41% <0.00%> (-80.00%)	⬇️
sdk/python/tests/utils/online_read_write_test.py	20.68% <0.00%> (-79.32%)	⬇️
...gration/registration/test_feature_service_apply.py	31.25% <0.00%> (-68.75%)	⬇️
sdk/python/feast/infra/online_stores/redis.py	25.17% <0.00%> (-67.69%)	⬇️
... and 53 more

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[achals]

/lgtm

[achals]

It would be a nicer error message here if we could point to which object was the unknown one.

[feast-ci-bot]

[APPROVALNOTIFIER] This PR is APPROVED

This pull-request has been approved by: achals, felixwang9817

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