fix: use the CRAN suggesting SystemRequirements field
#584
Workflow file for this run
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| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| name: Test package generation | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }} / ${{ matrix.config.rust-version }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: windows-latest, r: 'release', rust-version: 'stable-msvc', rust-target: 'x86_64-pc-windows-gnu'} | |
| - {os: windows-latest, r: 'devel', rust-version: 'stable-msvc', rust-target: 'x86_64-pc-windows-gnu'} | |
| - {os: windows-latest, r: 'oldrel', rust-version: 'stable-msvc', rust-target: 'x86_64-pc-windows-gnu', rtools-version: '42'} | |
| - {os: macOS-latest, r: 'release', rust-version: 'stable'} | |
| - {os: ubuntu-latest, r: 'release', rust-version: 'stable'} | |
| - {os: ubuntu-latest, r: 'devel', rust-version: 'stable'} | |
| - {os: ubuntu-latest, r: 'oldrel', rust-version: 'stable'} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| RSPM: ${{ matrix.config.rspm }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: dtolnay/rust-toolchain@master | |
| with: | |
| toolchain: ${{ matrix.config.rust-version }} | |
| targets: ${{ matrix.config.rust-target }} | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| rtools-version: ${{ matrix.config.rtools-version }} | |
| # TODO: enable RSPM when all the packages are available | |
| use-public-rspm: false | |
| - name: Set up pandoc | |
| uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| # increment this version number when we need to clear the cache | |
| cache-version: 3 | |
| extra-packages: rcmdcheck, devtools, usethis | |
| - name: Test package generation | |
| env: | |
| _R_CHECK_CRAN_INCOMING_REMOTE_: false | |
| run: | | |
| # preperation | |
| remotes::install_local(force = TRUE) | |
| temp_dir <- tempdir() | |
| pkg_dir <- file.path(temp_dir, "testpkg") | |
| dir.create(pkg_dir, recursive = TRUE) | |
| setwd(pkg_dir) | |
| Sys.setenv(REXTENDR_TEST_PKG_ROOT = getwd()) | |
| devtools::create(".") | |
| usethis::proj_activate(".") | |
| rextendr::use_extendr() | |
| usethis::use_mit_license() | |
| usethis::use_testthat() | |
| brio::write_lines( | |
| c( | |
| "test_that(\"`hello_world()` works\", {", | |
| " expect_equal(hello_world(), \"Hello world!\")", | |
| "})", | |
| "test_that(\"`rextendr::use_extendr()` works\", {", | |
| " wrap_path <- file.path(Sys.getenv(\"REXTENDR_TEST_PKG_ROOT\"), \"R\", \"extendr-wrappers.R\")", | |
| " expect_equal(readLines(wrap_path, 1), \"# Generated by extendr: Do not edit by hand\")", | |
| "})" | |
| ), | |
| file.path("tests", "testthat", "test-hello.R") | |
| ) | |
| # test NOT_CRAN envvar | |
| brio::write_lines( | |
| c( | |
| "if [ \"$NOT_CRAN\" != \"true\" ]; then", | |
| " exit 1", | |
| "fi" | |
| ), | |
| file.path("configure") | |
| ) | |
| Sys.chmod("configure", "0755") | |
| # TODO: allow warnings on oldrel (cf., https://stat.ethz.ch/pipermail/r-package-devel/2023q2/009229.html) | |
| if (.Platform$OS.type == "windows" && getRversion() < "4.3.0") { | |
| error_on <- "error" | |
| } else { | |
| error_on <- "warning" | |
| } | |
| # check if rextendr::document() compiles and generates wrappers properly | |
| rextendr::document() | |
| rcmdcheck::rcmdcheck( | |
| path = ".", | |
| args = c("--no-manual", "--as-cran"), | |
| error_on = error_on, | |
| check_dir = "check_use_extendr" | |
| ) | |
| library_path <- rextendr:::get_library_path() | |
| library_mtime_before <- file.info(library_path)$mtime | |
| wrappers_path <- file.path("R", "extendr-wrappers.R") | |
| wrappers_mtime_before <- file.info(wrappers_path)$mtime | |
| # check if rextendr::document() don't regenerate wrappers when unnecessary | |
| rextendr::document() | |
| stopifnot(library_mtime_before == file.info(library_path)$mtime) | |
| stopifnot(wrappers_mtime_before == file.info(wrappers_path)$mtime) | |
| # check if force = TRUE forces regenerating wrappers, but not compile | |
| rextendr::register_extendr(force = TRUE) | |
| stopifnot(library_mtime_before == file.info(library_path)$mtime) | |
| stopifnot(wrappers_mtime_before < file.info(wrappers_path)$mtime) | |
| wrappers_mtime_before <- file.info(wrappers_path)$mtime | |
| # check if compile = TRUE forces compile, and accordingly the wrapper generation | |
| rextendr::register_extendr(compile = TRUE) | |
| stopifnot(library_mtime_before < file.info(library_path)$mtime) | |
| stopifnot(wrappers_mtime_before < file.info(wrappers_path)$mtime) | |
| shell: Rscript {0} |