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MultiQC Version 1.10.1
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@ewels ewels released this 31 Mar 23:06
v1.10.1
82b483d

This is a relatively small release focussing just on bug fixes 🐛 - the last release revealed a couple of nasty ones which I felt were bad enough to justify a fast patch.. (99 bugs - fix 1, now you've got 103 bugs)

Many thanks to everyone who reports these problems along with example data 🕵🏻

MultiQC updates

  • Allow scientific notation numbers in colour scheme generation
    • Fixed bug with very small minimum numbers that only revelead itself after a bugfix done in the v1.10 release
  • Require at least rich version 9.4.0 to avoid SpinnerColumn AttributeError (#1393)
  • Dropped the Skipping search pattern log message from a warning to debug
  • Moved directory prepending with -d back to before sample name cleaning (as it was before v1.7) (#1264)
  • If linegraph plot data goes above ymax, only discard the data if the line doesn't come back again (#1257)
  • Allow top_modules to be specified as empty dicts (#1274)
  • Properly ignore .snakemake folders as intended (#1395)

Module updates

  • bcftools
    • Fixed bug where QUAL value . would crash MultiQC (#1400)
  • bowtie2
    • Fix bug where HiSAT2 paired-end bar plots were missing unaligned reads (#1230)
  • Deeptools
    • Handle plotProfile data where no upstream / downstream regions have been calculated around genes (#1317)
    • Fix IndexError caused by mysterious -1 in code.. (#1275)
  • FastQC
    • Replace NaN with 0 in the Per Base Sequence Content plot to avoid crashing the plot (#1246)
  • Picard
    • Fixed bug in ValidateSamFile module where additional whitespace at the end of the file would cause MultiQC to crash (#1397)
  • Somalier
    • Fixed bug where using sample name cleaning in a config would trigger a KeyError (#1234)
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