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goalign tranpose #9

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tseemann opened this issue Jan 10, 2021 · 1 comment

tseemann commented Jan 10, 2021 •

edited

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I am not sure if this can be done with existing comamnd:

% cat in.afa
>seq1
AAAA
>seq2
CCTT
>seq3
ACGT

% goalign transpose < in.afa 

>1
ACA
>2
ACC
>3
ATG
>4
ATT

% goalgn transpose -v 

# go from transposed back to alignment

The text was updated successfully, but these errors were encountered:

fredericlemoine added a commit that referenced this issue


          Added goalign transpose command #9

641a02f

fredericlemoine added a commit that referenced this issue


          Added cmd/transpose.go command #9

51d7678

Collaborator

fredericlemoine commented Jan 15, 2021

I added goalign transpose command (see doc), available in this pre-release.
Let me know if it helps.

fredericlemoine closed this as completed

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