Fixes to rolling and time-varying methods #98
Merged
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This PR fixes #95 and #97.
cfr_rolling()
has been updated to follow a similar logic tocfr_time_varying()
, where thebinom.test
function is only run on data indices where cumulative cases >= cumulative deaths, and cumulative cases > 0,cfr_rolling()
has been updated to have the same return format ascfr_time_varying()
,known_outcomes()
has been updated to account forNaN
from zero divisions (see Renameknown_outcomes()
toestimate_outcomes()
#93 as well),estimate_severity()
has been updated to deal with any two of total cases, deaths or outcomes being 0.