switch to directly calculated growth rate and extend model options, take 2#345

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sbfnk wants to merge 7 commits intomainfrom update_growth_and_generation

+505-195

Commits on May 17, 2024

make infection seeding a function

seabbs
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sbfnk
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update naming and extract seeding

seabbs
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sbfnk
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implement different model types
sbfnk
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simplify infection model and fix bug in usage of growth rate (keep everything on the log scale as long as possible)

seabbs
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sbfnk
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check all models compile

seabbs
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sbfnk
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update documentation

seabbs
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sbfnk
committed
fix rebase errors
sbfnk
committed