-
Notifications
You must be signed in to change notification settings - Fork 11
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Make excelparser that converts a filled excel sheet to an ontology #309
Conversation
Much of what is in this file should go into the excel2onto tool.
Added example folder
…ose-302-excelparser
removed rows with missing value in prefLabel Convert prefLabel to string
…ose-302-excelparser
@jesper-friis @sygout |
I tried to run make make_microstructure_onto.py and it crashes. |
The '1' is there only to test that it doe snot fail if prefLabel starts with a number, can be removed. However, if you remove it with a space you will get an error as you will effectively give it a prefLabel with space. |
Metadata should be factored out later
Co-authored-by: Jesper Friis <[email protected]>
Co-authored-by: Jesper Friis <[email protected]>
Co-authored-by: Jesper Friis <[email protected]>
data argument can either be metadata (pd.DataFrame) or a row for a concept (pd.Series)
…ose-302-excelparser
…ose-302-excelparser
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Very nice
Description:
Type of change:
Checklist of data that should be parsed in the minimal initial version that can be merged to master
Concepts
Metdata
Checklist:
This checklist can be used as a help for the reviewer.
Comments: