fig_reports and replacement

edilytics · Sep 13, 2022 · 858a751 · 858a751
1 parent 073f1fe
commit 858a751
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Showing 5 changed files with 183 additions and 288 deletions.
diff --git a/CRISPRessoReport.py b/CRISPRessoReport.py
@@ -101,7 +101,7 @@ def assemble_figs(run_data, crispresso_folder):
     amplicons = []
     for amplicon_name in run_data['results']['ref_names']:
         amplicons.append(amplicon_name)
-        amplicon_figures = {'names': [], 'locs': {}, 'titles': {}, 'captions': {}, 'datas': {}}
+        amplicon_figures = {'names': [], 'locs': {}, 'titles': {}, 'captions': {}, 'datas': {}, 'htmls': {}}
 
         for fig in ['2a', '3a', '3b', '4a', '4b', '4c', '4d', '4e', '4f', '4g', '5', '6', '7', '8', '10a', '10b', '10c',
                     '11a']:
@@ -133,6 +133,7 @@ def assemble_figs(run_data, crispresso_folder):
         figures['titles'][amplicon_name] = amplicon_figures['titles']
         figures['captions'][amplicon_name] = amplicon_figures['captions']
         figures['datas'][amplicon_name] = amplicon_figures['datas']
+        figures['htmls'][amplicon_name] = amplicon_figures['htmls']
     data = {'amplicons': amplicons, 'figures': figures}
     return data
 

diff --git a/templates/pooledReport.html b/templates/pooledReport.html
@@ -73,11 +73,7 @@ <h5>{{report_name}}</h5>
                 <h5 id="modification_summary_title">{{summary_plot_titles[plot_name]}}</h5>
               </div>
               <div class='card-body' style='max-height:80vh;overflow-y:auto'>
-		      <a href="{{crispresso_data_path}}{{plot_name}}.pdf"><img src="{{crispresso_data_path}}{{plot_name}}.png" width='70%' height='70%'></a>
-                <label class="labelpadding">{{summary_plot_labels[plot_name]}}</label>
-							  {% for (data_label,data_path) in summary_plot_datas[plot_name] %}
-							  <p class="m-0"><small>Data: <a href="{{crispresso_data_path}}{{data_path}}">{{data_label}}</a></small></p>
-                {% endfor %}
+                  {{ render_partials('shared/partials/fig_summaries.html', plot_name=plot_name, summary_plot_htmls=summary_plot_htmls, crispresso_data_path=crispresso_data_path, summary_plot_labels=summary_plot_labels, summary_plot_datas=summary_plot_datas) }}
               </div>
             </div>
             {% endfor %}