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Remove commented out lines
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Colelyman committed Nov 22, 2024
1 parent e80baa5 commit 7ddce13
Showing 1 changed file with 0 additions and 2 deletions.
2 changes: 0 additions & 2 deletions CRISPResso2/CRISPRessoPooledCORE.py
Original file line number Diff line number Diff line change
Expand Up @@ -1560,8 +1560,6 @@ def rreplace(s, old, new):

#if many reads weren't aligned, print those out for the user
if RUNNING_MODE != 'ONLY_GENOME':
#N_READS_INPUT=CRISPRessoShared.get_n_reads_fastq(args.fastq_r1)
#N_READS_AFTER_PREPROCESSING=CRISPRessoShared.get_n_reads_fastq(processed_output_filename)
tot_reads_aligned = df_summary_quantification['Reads_aligned'].fillna(0).sum()
tot_reads = df_summary_quantification['Reads_total'].sum()

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