Center command line text messages

CRISPResso2/CRISPRessoShared.py

@@ -1737,7 +1737,7 @@ def get_crispresso_header(description, header_str):
             output_line = (pad_string + logo_lines[i].ljust(max_logo_width) + pad_string).center(
                 term_width) + "\n" + output_line
 
-    output_line += '\n' + ('[CRISPResso version ' + __version__ + ']').center(term_width) + '\n' + (
+    output_line += '\n' + ('[CRISPResso version ' + __version__ + ']').center(term_width) + '\n' + format_cl_text(
         '[Note that starting in version 2.3.0 FLASh and Trimmomatic will be replaced by fastp for read merging and trimming. Accordingly, the --flash_command and --trimmomatic_command parameters will be replaced with --fastp_command. Also, --trimmomatic_options_string will be replaced with --fastp_options_string.\n\nAlso in version 2.3.0, when running CRISPRessoPooled in mixed-mode (amplicon file and genome are provided) the default behavior will be as if the --demultiplex_only_at_amplicons parameter is provided. This change means that reads and amplicons do not need to align to the exact locations.]').center(
         term_width) + "\n" + ('[For support contact [email protected] or [email protected]]').center(term_width) + "\n"