Remove base environment #7

	name: Run Pytest on Push

	on:
	push:
	branches:
	- '*'

	jobs:
	build:
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ["3.10"]

	steps:
	- uses: actions/checkout@v3
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v3
	with:
	python-version: ${{ matrix.python-version }}

	- name: Set up Conda
	uses: conda-incubator/setup-miniconda@v2

	- name: Install dependencies
	run: conda install -c defaults -c conda-forge -c bioconda -y -n base --debug -c bioconda trimmomatic flash numpy cython jinja2 tbb=2020.2 pyparsing=2.3.1 scipy matplotlib pandas plotly

	- name: Install Pytest And CRISPResso
	run: \|
	python -m pip install --upgrade pip
	pip install pytest pytest-cov
	pip install .

	- name: Run Pytest
	run: \|
	pytest tests

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