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definition.yml
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definition.yml
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method:
id: grandprix
tool_id: grandprix
name: GrandPrix
source: tool
platform: Python
url: https://github.com/ManchesterBioinference/GrandPrix
authors:
- given: Sumon
family: Ahmed
email: [email protected]
github: sumonahmedUoM
wrapper:
type: end_state_probabilities
trajectory_types:
- linear
- bifurcation
- multifurcation
topology_inference: parameter
input_required:
- expression
- end_n
input_optional: timecourse_continuous
container:
docker: dynverse/ti_grandprix
url: https://github.com/dynverse/ti_grandprix
manuscript:
doi: 10.1101/227843
google_scholar_cluster_id: '15033203703043818597'
preprint_date: '2017-12-03'
publication_date: '2018-07-02'
parameters:
- id: n_inducing_points
type: integer
distribution:
type: uniform
lower: 0
upper: 1
default: 40
- id: latent_prior_var
type: numeric
distribution:
type: uniform
lower: 0
upper: 1
default: 0.1
- id: latent_var
type: numeric
distribution:
type: uniform
lower: 0
upper: 1
default: 0.028