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Develop #1456

Merged
merged 136 commits into from
Feb 25, 2022
Merged

Develop #1456

merged 136 commits into from
Feb 25, 2022

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jprestop
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Pull Request Testing

  • Describe testing already performed for these changes:

  • Recommend testing for the reviewer(s) to perform, including the location of input datasets, and any additional instructions:

  • Do these changes include sufficient documentation updates, ensuring that no errors or warnings exist in the build of the documentation? [Yes or No]

  • Do these changes include sufficient testing updates? [Yes or No]

  • Will this PR result in changes to the test suite? [Yes or No]

    If yes, describe the new output and/or changes to the existing output:

  • Please complete this pull request review by [Fill in date].

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bikegeek and others added 30 commits October 27, 2021 15:48
* Github #1091 add support to define plot's extent

* Github #1091 Add support for defining plot's extent

* Github #1091 add support for defining plot extent

* GitHub #1091 Provide support to define plotting a bounding box of interest and replace deprecated cartopy attributes.

* Github Issue #1091 Add configuration support to define the bounding box defining the area of interest to plot.

* Github Issue #1091 provide support to define bounding box defining the area of interest to plot.

* Github Issue #1091 Removed unused shapely imports

* GItHub Issue #1091 

Removed duplicate CYCLONE_PLOTTER_GLOBAL_PLOT

* Github #1091 Include config settings needed to indicate the region of interest to be plotted.

* Github Issue #1091 Keep only the North Hemisphere lon and lats in the config file to serve as example for plotting a specific area of the map.
* first attempt at a table #1049

* 2nd attempt, smaller, different formatting table #1049

* trying to get rid of git error message by adding this to the index #1049

* alignment #1049

* trying to text wrap in a table #1049

* attempting to create text wrapping in tables #1049

* removing role, trying to wrap text #1049

* removing html break, trying to wrap text #1049

* adding code to wrap text #1049

* removing code to wrap text #1049

* fixing naming typo #1049

* hitting returns in table #1049

* removing typo file, removing line breaks #1049

* attempting a simple table for text wrapping #1049

* attempting to bold header row in simple table #1049

* simple table line break attempt #1049

* simple table line break attempt #2 #1049

* simple table line break attempt #3 #1049

* trying another | #1049

* 2 trying another | #1049

* 3 trying another | #1049

* trying a blank line #1049

* trying reformating grid #1049

* 2 trying reformating grid #1049

* 3 trying reformating grid #1049

* 4 trying reformating grid #1049

* adding in one more table row #1049

* adding more text #1049

* trying glossary format #1049

* 2 trying glossary format #1049

* 3 trying glossary format #1049

* 4 trying glossary format #1049

* adding glossary format 2D objects #1049

* fixing glossary format 2D objects #1049

* adding glossary items #1049

* fixing glossary format #1049

* hopefully all examples are working #1049

* changing reference to tool

* removing 2D object examples

* removing the unwrapped table

* adding ACC into the example

* fixing formatting #1049

* fixing formatting take 2 #1049

* fixing formatting take 3 #1049

* bolding and language change #1049

* fixing spacing #1049

* fixing spacing again #1049

* changing title #1049

* trying superscript #1049

* superscript glossary #1049

* removing quotes #1049

* fixing spacing #1049

* Tara has decided to go with the glossary format.  Removing table example. #1049

* Adding 2D objects #1049

* 2D objects fix #1049

* 2D objects fix attempt 2 #1049

* 2D objects fix attempt 3 #1049

* 2D objects fix attempt 4 #1049

* 2D objects fix attempt 5 #1049

* 2D objects fix attempt 7 #1049

* 2D objects fix attempt 8 #1049

* ABR added #1049

* adding remaining AB items to list #1049

* adding remaining ACC_ items to list #1049

* ADLAND & AFSS entries #1049

* A entries #1049

* fixing formatting #1049

* fixing formatting #2 #1049

* removing new entries to make it run #1049

* adding a couple back in #1049

* adding a couple more back in #1049

* tool key at the bottom #1049

* spacing changes #1049

* spacing changes another try #1049

* fixing spacing #1049

* fixing spacing attempt 2 #1049

* fixing spacing attempt 3 #1049

* through AREA items #1049

* AMODEL listed twice but it's not #1049

* AMODEL listed twice but it's not #2 #1049

* AMODEL added question marks so it will run #1049

* final A entries #1049

* naming the glossary statistics in hopes of not conflicting with original glossary #1049

* removing glossary statistics space #1049

* Testing multiple glossary names

* Per #1067, working on attempts to have multiple glossaries with the same term

* Per #1067, working on attempts to have multiple glossaries with the same term

* Per #1067, working on attempts to have multiple glossaries with the same term

* Per #1067, removing code with attempts at mutiple glossaries

* Per #1067, adding back three question marks due to duplicate term

* paring down list, adding a table for review

* problems with table

* still trying to get it to publish

* still trying to get a second line in the table

* still trying to get a second line in the table 2

* testing different formatting

* testing different formatting

* trying to comment out the glossary inner workings

* formatting again

* line breaks in table #1049

* adding in some more for an example #1049

* adding new entries in through AREA #1049

* fixing line breaks #1049

* fixing line breaks #1049 #2

* fixing line breaks and warning messages #1049

* fixing line breaks #1049

* adding AREA_RATIO through ASPECT_DIFF

* fixing typo #1049

* fixing typo #1049

* fixing typo #1049 take 2

* adding AXIS_ANG to BCMSE #1049

* adding spacing #1049

* adding spacing removing commas #1049

* removing comma #1049

* BOUNDARY_DIST thru BSS_SMPL #1049

* BOUNDARY_DIST splitting across 2 lines #1049

* cleaning up typos #1049

* calibration thru centriod_dist #1049

* centriod_lat thru centroid_y #1049

* fixing spacing #1049

* removing test glossary #1049

* climo_mean thru crtk_err #1049

* fixing crtk_err spacing #1049

* fixing spacing #1049

* CSI to CURVATURE_Y #1049

* CURVATURE_X & Y spacing #1049

* DEV_CAT to DURATION_DIFF #1049

* EC_VALUE to F #1049

* F_RATE TO FBS #1049

* Fixing spacing #1049

* fcst_clus thru fcst_conv_radius #1049

* removing CTOP_PRS #1049

* fixing the order of tools for FBAR and FBIAS #1049

* fixing spacing #1049

* adding grid-stat to all point-stat entries #1049

* adding fixing spacing #1049

* adding fixing spacing take 2  #1049

* adding fixing spacing take 3  #1049

* adding fixing spacing take 4  #1049

* adding fixing spacing take 5  #1049

* adding fixing spacing take 6  #1049

* adding fixing spacing take 7  #1049

* fixing spacing with a period take 7  #1049

* first attempt fcst_  #1049

* fixing typos #1049

* thru FOBAR #1049

* thru end of F #1049

* g thru h #1049

* i thru intensity #s #1049

* fixing typos #1049

* capturing example for Julie #1049

* thru k #1049

* fixing typos #1049

* thru L #1049

* thru MG #1049

* thru N_ENS #1049

* thru all N #1049

* fixing FBIAS alignment #1049

* fixing ME and MSE alignment #1049

* fixing ME alignment take 2 #1049

* thru OBS_E #1049

* fixing alignment #1049

* fixing alignment n_thresh #1049

* thru OBS_thresh #1049

* thru O #1049

* fixing OOBAR formating #1049

* thru PR_CORR #1049

* commented lines out with line total info #1049

* commented lines out with line total info take 2 #1049

* thru R #1049

* thru SPEED #1049

* thru S #1049

* thru T #1049

* thru U #1049

* thru V #1049

* thru V #1049

* thru Z #1049

* Update statistics_list.rst

Tara is testing editing in UI

* Update statistics_list.rst

Updates through the A's

* Update statistics_list.rst

Cleaning up the A's

* Update statistics_list.rst

Standardizing MODE and MTD entries

* Update statistics_list.rst

Updating B's and C's

* Update statistics_list.rst

Testing adding TC-Stat and TCST to an entry

* Update statistics_list.rst

Clean up of a few A-Cs and then update of Ds

* Update statistics_list.rst

A few clean-ups and Es

* Update statistics_list.rst

Halfway through Fs...

* Update statistics_list.rst

A little clean up and the rest of Fs

* Update statistics_list.rst

G, H, I, Ks

* Update statistics_list.rst

L, M, Ns

* Update statistics_list.rst

A little clean-up and Os

* Update statistics_list.rst

A little clean-up and Os

* Update statistics_list.rst

Rs

* Update statistics_list.rst

S and Ts

* Update statistics_list.rst

The rest of the list

* Update statistics_list.rst

Removed Attr from Stat Type thru E

* Update statistics_list.rst

Remove Attr from Statistics Type through Gs

* Update statistics_list.rst

Remove Attr from Statistic Type through Rs

* Update statistics_list.rst

Remove Attr from Stat Type to the end

* Update statistics_list.rst

Cleaned up some Line Type typos

* Update statistics_list.rst

Still more Attr cleanup

Co-authored-by: Julie Prestopnik <[email protected]>
Co-authored-by: TaraJensen <[email protected]>
* Per #934 add stages of the METplus release cycle.

* Per #934, adding link to descriptions of the release cycle in the User's Guide.

* Per #934, made corrections

* Per #934, changed Beta and Release Candidate (rc) from bold to subsubsections.

* Update index.rst

Co-authored-by: Julie Prestopnik <[email protected]>
… User's Guide instead of downloading it and attaching it to the release
…rnal repository such as MET to test to ensure that changes from that repo will break anything in METplus
CPKalb and others added 29 commits February 9, 2022 15:18
Co-authored-by: Hank Fisher <[email protected]>
Co-authored-by: George McCabe <[email protected]>
…tcenter/METplotpy#197. Once that PR is merged into develop, a test workflow will run that should fix this issue.
…_mount_directories file is updated in the upcoming version directory, i.e. v4.1, so that the Docker data volumes from the release will be created properly
… should not be added to new version directory
Co-authored-by: Mrinal Biswas <[email protected]>
Co-authored-by: George McCabe <[email protected]>
* Update UserScript_obsPrecip_obsOnly_Hovmoeller.py

replace hovmoeller_diagram.conf with UserScript_obsPrecip_obsOnly_Hovmoeller.conf

* Update UserScript_obsPrecip_obsOnly_Hovmoeller.py

Removed a typo: UserScript This uses data from...

Now: This uses data from...

* Update UserScript_obsPrecip_obsOnly_Hovmoeller.py
* creating new METplus Components Python Requirements

* adding a return to test

* testing use case links

* testing use case links #2

* testing use case links #3

* testing use case links #4

* Filling in some use cases

* fixing indentation #1403

* fixing indentation #1403 take 2

* fixing indentation #1403 take 3

* cleaning up anything after # in the links #1403

* entries thru D #1403

* entries thru H #1403

* fixing indents #1403

* fixing indents #1403 take 2

* fixing web name #1403

* entries thru L #1403

* entry matplotlib #1403

* entry matplotlib #1403 marking duplicate names

* entry metcalcpy #1403

* entry metcalcpy fix indents #1403

* entry matplotlib #1403 fixing duplicate names

* entry metplotpy #1403

* entry metplotpy #1403 marking duplicate names

* entry metplotpy #1403 fixing

* entry thru ps #1403

* double names #1403

* character fix #1403

* adding in missing links #1403

* thru pyproj #1403

* problem with line 353 #1403

* thru pyproj #1403 typos

* more duplicate names #1403

* line break #1403

* loose ends #1403

* adding >= to some of the versions #1403

* adding name to the Use Cases to avoid duplicate naming issues TEST #1403

* adding name to the Use Cases to avoid duplicate naming issues thru pyproj #1403

* adding thru pyresample #1403

* fixing pyresample typo #1403

* adding thru  scikit-image #1403

* fixing line breaks#1403

* web links thru  scikit-learn #1403

* web links thru scipy #1403

* web links thru sklearn #1403

* Duplicate web names. temp. fix #1403

* Duplicate web names fixed #1403

* Duplicate web names fixing #3 #1403

* Duplicate web names fixing #4 #1403

* Duplicate web names fixing #5 #1403

* table end #1403

* table loose ends #1403

* Removed unnecessary comma

* table loose ends after pull request #1403

* Minor modifications to METplus Component column

* Changed description of pyproj

* Added link for last referenced use case

* Attempting to fix doc warning

Co-authored-by: jprestop <[email protected]>
* Correct small typo.

* Update pull_request_template.md

* Added files for ReadTheDocs (#864)

* Updated documentation links for ReadtheDocs

* Update pull_request_template.md

Added entry for completion date for pull request review.

* Adding python embedding script to read AVISO, RTOFS, HYCOM and OSTIA data

* Updated the script - working but only RMSE values match

* Adding documentation for the AVISO case

* Adding a conf file for the AVISO case

* Updates to the codel to include model3, obs, climo3 but also has many extra print statements, netcdf output files which needs to be cleaned

* Cleaning up the conf file and adding SAL1L2 to get the model_climo sdev and obs_climo sdev

* Updating the file to fix the standard names and add the model3, climo3 and obs3

* Updating the file to fix the standard names and add the model3, climo3 and obs3

* Adding an image to the use case. Image Courtesy: EMC/NOAA website

* added to use case list

* updated case description

* removed merge issues

* caught second docs issue

* removed other doc merge issues, turned off auto test

* more merge comments sneaking in

Co-authored-by: johnhg <[email protected]>
Co-authored-by: jprestop <[email protected]>
Co-authored-by: Mrinal Biswas <[email protected]>
@jprestop jprestop merged commit d5e37a2 into develop-ref Feb 25, 2022
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9 participants