per #896, add support for setting all output_stats values in SeriesAn…

…alysis wrapped MET config file and rearranged basic use case conf for readability, ci-run-all-diff

parm/use_cases/met_tool_wrapper/SeriesAnalysis/SeriesAnalysis.conf

@@ -1,54 +1,86 @@
-# SeriesAnalysis METplus Configuration
-
 [config]
 
 PROCESS_LIST = SeriesAnalysis
 
-LOOP_BY = INIT
+###
+# Time Info
+###
 
+LOOP_BY = INIT
 INIT_TIME_FMT = %Y%m%d%H
-
 INIT_BEG=2005080700
-
 INIT_END=2005080700
-
 INIT_INCREMENT = 12H
 
 LEAD_SEQ = 12, 9, 6
 
-SERIES_ANALYSIS_CUSTOM_LOOP_LIST = 
+SERIES_ANALYSIS_RUNTIME_FREQ = RUN_ONCE_PER_INIT_OR_VALID
 
-LOOP_ORDER = processes
+SERIES_ANALYSIS_RUN_ONCE_PER_STORM_ID = False
 
-#LOG_SERIES_ANALYSIS_VERBOSITY = 2
+SERIES_ANALYSIS_CUSTOM_LOOP_LIST =
 
-SERIES_ANALYSIS_IS_PAIRED = False
+###
+# File I/O
+###
 
-SERIES_ANALYSIS_GENERATE_PLOTS = no
+FCST_SERIES_ANALYSIS_INPUT_DIR = {INPUT_BASE}/met_test/data/sample_fcst
+FCST_SERIES_ANALYSIS_INPUT_TEMPLATE = {init?fmt=%Y%m%d%H}/wrfprs_ruc13_{lead?fmt=%2H}.tm00_G212
 
-PLOT_DATA_PLANE_TITLE =
+OBS_SERIES_ANALYSIS_INPUT_DIR = {INPUT_BASE}/met_test/new
+OBS_SERIES_ANALYSIS_INPUT_TEMPLATE = ST2ml{valid?fmt=%Y%m%d%H}_A03h.nc
 
-SERIES_ANALYSIS_GENERATE_ANIMATIONS = no
+SERIES_ANALYSIS_TC_STAT_INPUT_DIR =
+SERIES_ANALYSIS_TC_STAT_INPUT_TEMPLATE =
+
+SERIES_ANALYSIS_OUTPUT_DIR = {OUTPUT_BASE}/met_tool_wrapper/SeriesAnalysis
+SERIES_ANALYSIS_OUTPUT_TEMPLATE = {init?fmt=%Y%m%d%H}_sa.nc
+
+SERIES_ANALYSIS_CLIMO_MEAN_INPUT_DIR =
+SERIES_ANALYSIS_CLIMO_MEAN_INPUT_TEMPLATE =
+
+SERIES_ANALYSIS_CLIMO_STDEV_INPUT_DIR =
+SERIES_ANALYSIS_CLIMO_STDEV_INPUT_TEMPLATE =
+
+
+###
+# Field Info
+###
+
+MODEL = WRF
+OBTYPE = MC_PCP
+
+FCST_VAR1_NAME = APCP
+FCST_VAR1_LEVELS = A03
+
+OBS_VAR1_NAME = APCP_03
+OBS_VAR1_LEVELS = "(*,*)"
+
+BOTH_VAR1_THRESH = gt12.7, gt25.4, gt50.8, gt76.2
 
-SERIES_ANALYSIS_CONFIG_FILE = {CONFIG_DIR}/SeriesAnalysisConfig_wrapped
+###
+# SeriesAnalysis
+###
 
-SERIES_ANALYSIS_STAT_LIST = TOTAL, RMSE, FBAR, OBAR
+#LOG_SERIES_ANALYSIS_VERBOSITY = 2
+
+SERIES_ANALYSIS_CONFIG_FILE = {PARM_BASE}/met_config/SeriesAnalysisConfig_wrapped
 
-SERIES_ANALYSIS_DESC =
+SERIES_ANALYSIS_IS_PAIRED = False
 
-SERIES_ANALYSIS_CAT_THRESH =
+#SERIES_ANALYSIS_DESC =
 
-SERIES_ANALYSIS_VLD_THRESH =
+#SERIES_ANALYSIS_CAT_THRESH =
 
-SERIES_ANALYSIS_BLOCK_SIZE =
+#SERIES_ANALYSIS_VLD_THRESH =
 
-SERIES_ANALYSIS_CTS_LIST =
+#SERIES_ANALYSIS_BLOCK_SIZE =
 
-SERIES_ANALYSIS_REGRID_TO_GRID =
-SERIES_ANALYSIS_REGRID_METHOD =
-SERIES_ANALYSIS_REGRID_WIDTH =
-SERIES_ANALYSIS_REGRID_VLD_THRESH =
-SERIES_ANALYSIS_REGRID_SHAPE =
+#SERIES_ANALYSIS_REGRID_TO_GRID =
+#SERIES_ANALYSIS_REGRID_METHOD =
+#SERIES_ANALYSIS_REGRID_WIDTH =
+#SERIES_ANALYSIS_REGRID_VLD_THRESH =
+#SERIES_ANALYSIS_REGRID_SHAPE =
 
 #SERIES_ANALYSIS_CLIMO_MEAN_FILE_NAME =
 #SERIES_ANALYSIS_CLIMO_MEAN_FIELD =
@@ -74,51 +106,31 @@ SERIES_ANALYSIS_REGRID_SHAPE =
 
 #SERIES_ANALYSIS_HSS_EC_VALUE =
 
-SERIES_ANALYSIS_RUNTIME_FREQ = RUN_ONCE_PER_INIT_OR_VALID
+#FCST_SERIES_ANALYSIS_PROB_THRESH =
 
-SERIES_ANALYSIS_RUN_ONCE_PER_STORM_ID = False
+#SERIES_ANALYSIS_OUTPUT_STATS_FHO =
+#SERIES_ANALYSIS_OUTPUT_STATS_CTC =
+#SERIES_ANALYSIS_OUTPUT_STATS_CTS =
+#SERIES_ANALYSIS_OUTPUT_STATS_MCTC =
+#SERIES_ANALYSIS_OUTPUT_STATS_MCTS =
 
-MODEL = WRF
+SERIES_ANALYSIS_OUTPUT_STATS_CNT = TOTAL, RMSE, FBAR, OBAR
 
-OBTYPE = MC_PCP
-
-#FCST_SERIES_ANALYSIS_PROB_THRESH = 
+#SERIES_ANALYSIS_OUTPUT_STATS_SL1L2 =
+#SERIES_ANALYSIS_OUTPUT_STATS_SAL1L2 =
+#SERIES_ANALYSIS_OUTPUT_STATS_PCT =
+#SERIES_ANALYSIS_OUTPUT_STATS_PSTD =
+#SERIES_ANALYSIS_OUTPUT_STATS_PJC =
+#SERIES_ANALYSIS_OUTPUT_STATS_PRC =
 
-FCST_VAR1_NAME = APCP
-
-FCST_VAR1_LEVELS = A03
 
-OBS_VAR1_NAME = APCP_03
-
-OBS_VAR1_LEVELS = "(*,*)"
-
-BOTH_VAR1_THRESH = gt12.7, gt25.4, gt50.8, gt76.2
-
-[dir]
-CONFIG_DIR={PARM_BASE}/met_config
-
-FCST_SERIES_ANALYSIS_INPUT_DIR = {INPUT_BASE}/met_test/data/sample_fcst
-
-OBS_SERIES_ANALYSIS_INPUT_DIR = {INPUT_BASE}/met_test/new
+###
+# Plotting
+###
 
-SERIES_ANALYSIS_CLIMO_MEAN_INPUT_DIR =
-
-SERIES_ANALYSIS_CLIMO_STDEV_INPUT_DIR =
-
-SERIES_ANALYSIS_TC_STAT_INPUT_DIR =
-
-SERIES_ANALYSIS_OUTPUT_DIR = {OUTPUT_BASE}/met_tool_wrapper/SeriesAnalysis
-
-[filename_templates]
-
-FCST_SERIES_ANALYSIS_INPUT_TEMPLATE = {init?fmt=%Y%m%d%H}/wrfprs_ruc13_{lead?fmt=%2H}.tm00_G212
-
-OBS_SERIES_ANALYSIS_INPUT_TEMPLATE = ST2ml{valid?fmt=%Y%m%d%H}_A03h.nc
-
-SERIES_ANALYSIS_OUTPUT_TEMPLATE = {init?fmt=%Y%m%d%H}_sa.nc
+SERIES_ANALYSIS_GENERATE_PLOTS = no
 
-SERIES_ANALYSIS_CLIMO_MEAN_INPUT_TEMPLATE =
+PLOT_DATA_PLANE_TITLE =
 
-SERIES_ANALYSIS_CLIMO_STDEV_INPUT_TEMPLATE =
+SERIES_ANALYSIS_GENERATE_ANIMATIONS = no
 
-SERIES_ANALYSIS_TC_STAT_INPUT_TEMPLATE =