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Fix smoke test #760

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merged 2 commits into from
Dec 18, 2024
Merged

Fix smoke test #760

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f433ef4
Revert "Merge pull request #754 from dirac-institute/upgrade_numpy"
jeremykubica Dec 17, 2024
7f3dc49
Fix the mock fits errors
jeremykubica Dec 17, 2024
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2 changes: 1 addition & 1 deletion include/eigen
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Submodule eigen updated from c01ff4 to 6d829e
2 changes: 1 addition & 1 deletion lib/pybind11
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Submodule pybind11 updated 222 files
26 changes: 14 additions & 12 deletions pyproject.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -32,17 +32,16 @@ classifiers = [
]
dynamic = ["version"]
dependencies = [
"astropy>=6.1",
"astroquery>=0.4.7",
"dask[array]>=2024.4.1", # Needed for astropy library dependency
"astropy>=5.1",
"astroquery>=0.4.6",
"jax",
"jaxlib",
"matplotlib>=3.9",
"numpy>=2.0",
"pandas>=2.2", # Needed for scikit_learn
"joblib>=1.4",
"matplotlib>=3.5",
"numpy<2.0",
"pandas>=1.5.1",
"reproject",
"scipy>=1.13",
"scikit_learn>=1.5.0",
"scipy>=1.9.2",
"scikit_learn>=1.0.0",
"koffi>=0.1.1",
"jplephem",
"PyYAML>=6.0"
Expand All @@ -56,12 +55,15 @@ Changelog = "https://epyc.astro.washington.edu/~kbmod/project_details/release_no

[project.optional-dependencies]
analysis = [
"ephem>=4.1",
"tensorflow>=2.9",
"matplotlib>=3.6.1",
"ipywidgets>=8.0",
"ephem>=4.1"
]
docs = [
"sphinx>=8.0",
"sphinx-gallery",
"sphinx",
# https://github.com/spatialaudio/nbsphinx/issues/655
"sphinx-gallery<0.11",
"sphinx-codeautolink",
"sphinx-design",
"numpydoc",
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1 change: 0 additions & 1 deletion tests/test_results.py
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Original file line number Diff line number Diff line change
Expand Up @@ -278,7 +278,6 @@ def test_is_empty_value(self):
self.assertFalse(np.any(nums_is_empty))

pairs_is_empty = table.is_empty_value("pairs")
print(pairs_is_empty)
self.assertTrue(np.array_equal(pairs_is_empty, expected))

def test_filter_by_index(self):
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8 changes: 8 additions & 0 deletions tests/utils/mock_fits.py
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Expand Up @@ -161,6 +161,14 @@ def get_fits(self, fits_idx, spoof_data=False):
warnings.filterwarnings("ignore", category=AstropyUserWarning)
for hdr_idx, HDUClass in enumerate(self.hdu_types):
hdr = HDUClass()

# Remove the cards that know we will reinsert them below and
# require a specific order. We rely on the file order.
for key in ["GCOUNT", "NAXIS", "NAXIS1", "NAXIS2", "PCOUNT"]:
if key in hdr.header:
del hdr.header[key]

# Insert all the cards from the file.
for k, v, f in hdu_group.groups[hdr_idx]["keyword", "value", "format"]:
hdr.header[k] = self.lexical_cast(v, f)
hdul.append(hdr)
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