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[WIP] update snakemake version #200

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ctb wants to merge 1 commit into latest from update/envs

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ctb commented Nov 1, 2021

This PR updates snakemake to 6.10.0.

There are a few other misc changes -

limit Python to < 3.10 for now
add a print statement that makes genome download clearer

Maybe TODO:

update sourmash to 4.2.2 (?)
switch to using sourmash sketch rather than sourmash compute


          update snakemake version. limit python version

327e8ef

ctb mentioned this pull request

running charcoal on GTDB: using snakemake to run really large charcoal runs #199

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