feat: resolve all the pnpm issues without hostied config

[beyondkmp]

In this PR(#132), only the case of files with the same name has been fixed. If it's not a file but a folder, and there's a package.json inside, it will lead to obtaining the wrong package.

Therefore, FindParentWithFile is incorrect. It shouldn't directly search upwards, as searching upwards can result in finding packages outside of node_modules.

To implement the non-hoisted mode under pnpm, we just need to replace the dir in the dependency with the actual dir.

app-builder/pkg/node-modules/nodeModuleCollector.go

Line 299 in 82d3a96

dependency.dir = resolvePath(dependencyDir)

Combined with the hoisted conversion algorithm in this MR(#134), it can solve the issues mentioned below.

fix:
#84
#92
#93

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