adding back in all of the deepuq/ folders

CHANGELOG.md

@@ -1,5 +1,9 @@
 # Changelog
 
+## [0.1.2] - 2024-10-25
+### Fixed
+- Decided to rename src/ to deepuq/ in order for easier imports
+
 ## [0.1.1] - 2024-10-23
 ### Fixed
 - Fixed packaging to enable use of commands for running scripts.

src/data/__init__.py → deepuq/data/__init__.py

@@ -1,4 +1,4 @@
-from src.data.data import MyDataLoader, DataPreparation
+from deepuq.data.data import MyDataLoader, DataPreparation
 
 DataModules = {
     "MyDataLoader": MyDataLoader,

src/models/__init__.py → deepuq/models/__init__.py

@@ -1,3 +1,3 @@
-from src.models.models import ModelLoader
+from deepuq.models.models import ModelLoader
 
 ModelModules = {"ModelLoader": ModelLoader}

src/scripts/DeepEnsemble.py → deepuq/scripts/DeepEnsemble.py

@@ -7,19 +7,13 @@
 import torch
 from torch.utils.data import TensorDataset, DataLoader
 
-# from scripts import train, models, io
-from src.train import train
-from src.models import models
-from src.data import DataModules
-from src.models import ModelModules
-from src.utils.config import Config
-from src.utils.defaults import DefaultsDE
-from src.data.data import DataPreparation, MyDataLoader
-
-# from analyze.analyze import AggregateCheckpoints
-
-# from plots import Plots
-
+from deepuq.train import train
+from deepuq.models import models
+from deepuq.data import DataModules
+from deepuq.models import ModelModules
+from deepuq.utils.config import Config
+from deepuq.utils.defaults import DefaultsDE
+from deepuq.data.data import DataPreparation, MyDataLoader
 
 def parse_args():
     """Parses command-line (or config) arguments for the DeepEnsemble script.

src/scripts/DeepEvidentialRegression.py → deepuq/scripts/DeepEvidentialRegression.py

@@ -8,13 +8,13 @@
 from torch.utils.data import TensorDataset, DataLoader
 
 # from scripts import train, models, io
-from src.train import train
-from src.models import models
-from src.data import DataModules
-from src.models import ModelModules
-from src.utils.config import Config
-from src.utils.defaults import DefaultsDER
-from src.data.data import DataPreparation, MyDataLoader
+from deepuq.train import train
+from deepuq.models import models
+from deepuq.data import DataModules
+from deepuq.models import ModelModules
+from deepuq.utils.config import Config
+from deepuq.utils.defaults import DefaultsDER
+from deepuq.data.data import DataPreparation, MyDataLoader
 
 # from plots import Plots
 

src/train/train.py → deepuq/train/train.py

@@ -4,7 +4,7 @@
 import glob
 import numpy as np
 import matplotlib.pyplot as plt
-from src.models import models
+from deepuq.models import models
 
 
 def set_random_seeds(seed_value=42):

src/utils/config.py → deepuq/utils/config.py

@@ -1,7 +1,7 @@
 from typing import Optional
 import os
 import yaml
-from src.utils.defaults import (
+from deepuq.utils.defaults import (
     DefaultsDE,
     DefaultsDER,
     DefaultsAnalysis,

pyproject.toml

@@ -1,7 +1,7 @@
 [tool.poetry]
 name = "DeepUQ"
-packages = [{include = "src"}]
-version = "0.1.1"
+packages = [{include = "deepuq"}]
+version = "0.1.2"
 description = "a package for investigating and comparing the predictive uncertainties from deep learning models"
 authors = ["beckynevin <[email protected]>"]
 readme = "README.md"