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fix bug of custom op's multiple initialization #812

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merged 13 commits into from
Jun 30, 2021

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This implementation should fix both issue#668 and issue#773.

denghuilu and others added 13 commits June 15, 2021 11:01
add Important hint for getting-started.md

Update argcheck.py

add Important hint for variables

Update getting-started.md

check validity of data systems. print help message

add Important hint at getting-start.md (deepmodeling#622)

* add Important hint for getting-started.md

* add hint for some parameters

* add Important hint for variables

* Update argcheck.py

* Update getting-started.md

add doc of type embedding (deepmodeling#625)

Optimized mkindex function in doc/conf.py and added two files in troubleshooting. (deepmodeling#619)

support MPI and other atom_styles for LAMMPS atomic keyword (deepmodeling#628)

* support MPI and other atom_styles for LAMMPS atomic keyword

fix problems left in #44

* move out_each codes together

* indent the code

fix spell mistake (deepmodeling#638)

Atention -> Attention

Readme and Examples for Tensor mode (deepmodeling#632)

* Complete modification of tensor training, support combination of system with global/local label, and support polar label normalization to speed up training. Examples and documentation not added yet

* modify dipole json to pass ut test

* change json file (second time) to pass ut test

* modify test_data_modifier_shuffle.py file to fit new args rule

* modify data_modifier_shuffle: from dipole.npy to atomic_dipole.npy

* modify the name of pref_weight to pref and pref_atomic_weight to pref_atomic, plus some implementation mentioned by Han Wang in May 7th's email

* fix a bug occuring in ut test

* fix args of polar_se_a.json, to pass ut test

* change args: from loss_type to type, so that the args will be the same as ener mode, and will not cause conflict

* add examples and readme for tensor fitting mode in May 14

* change readmd content of tensor fit

* change the file name of readme file of tensor fitting

* Update train-fitting-tensor.md

* Update train-fitting-tensor.md

* Update train-fitting-tensor.md

* change the explanation of why some of lcurve.out is 0

* Update train-fitting-tensor.md

* Update train-fitting-tensor.md

append to out_file when LAMMPS restarts (deepmodeling#640)

This ensures the out file will not be override when LAMMPS restarts.
This commit may be conflicted with deepmodeling#392. Commit
@5597ea2b49f96e99a52a9779b04b6c12e5a79a04 should be dropped.

add an example of C++ inference to doc (deepmodeling#652)

* add an example of C++ inference to doc

* fix broken link

Add instructions for i-PI (deepmodeling#660)

* Add instructions for i-PI

* Update doc/getting-started.md

Co-authored-by: Jinzhe Zeng <[email protected]>

Co-authored-by: tuoping <[email protected]>
Co-authored-by: Jinzhe Zeng <[email protected]>

Added doc for netsize setting, num_nodes specification, and sel setting in doc/troubleshooting/ (deepmodeling#657)

fix issue 668 (deepmodeling#680)

* fix bug of issue 668
@denghuilu denghuilu requested review from amcadmus and iProzd June 29, 2021 12:54
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codecov-commenter commented Jun 29, 2021

Codecov Report

Merging #812 (d813406) into devel (b956217) will increase coverage by 0.01%.
The diff coverage is n/a.

Impacted file tree graph

@@            Coverage Diff             @@
##            devel     #812      +/-   ##
==========================================
+ Coverage   73.68%   73.69%   +0.01%     
==========================================
  Files          85       79       -6     
  Lines        6646     6631      -15     
==========================================
- Hits         4897     4887      -10     
+ Misses       1749     1744       -5     
Impacted Files Coverage Δ
source/api_cc/include/DataModifier.h
source/lib/include/SimulationRegion.h
source/api_cc/include/DeepPot.h
source/api_cc/include/DeepTensor.h
source/api_cc/include/AtomMap.h
source/lib/include/neighbor_list.h

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@amcadmus amcadmus merged commit 0ae7cea into deepmodeling:devel Jun 30, 2021
@denghuilu denghuilu deleted the fix773 branch June 30, 2021 01:06
gzq942560379 pushed a commit to HPC-AI-Team/deepmd-kit that referenced this pull request Sep 2, 2021
njzjz added a commit to njzjz/deepmd-kit that referenced this pull request Sep 21, 2023
* fix UT test_make_md

* remove debug line
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3 participants