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Breakage with the latest version of knitr #621
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Hello I believe that the problem does not appear in the dev version - work on the tests is in progress and seems to have eliminated this problem (by chance). I will double check to be sure and let you know soon. When do you plan a submission? If I can submit before your submission, you could delete the workaround. On my side, I have to wait for the submission of a reverse dependency and then it can be done. |
I plan to make a submission today. No hurry for you to release a new version. I can remove the hack on my side next time. Thank you! |
I can confirm that the dev version of flextable works fine with knitr without the workaround. |
Kyle F Butts (2): Add support for `# %%` for chunk demarcation in `knitr::spin` (#2307) make spin() recognize `#|` comments as code chunks (#2320) Lee Mendelowitz (1): Fix the error when kable()'s caption value is of length > 1 (#2312) Max Schmit (1): add ALTER as sql statment, that is not returning anything (#2330) Yihui Xie (53): start the next version fix #2304: shouldn't have used `return(meta)` since `meta` is not the `citation()` but `packageDescription()` fix rstudio/rmarkdown#2526 by reverting bebf117 since the `cairo_pdf` device has been explicitly supported in chunk_device(); now all possible `pdf()` arguments are supported, including `family` Disallow unbalanced chunk delimiters (#2306) close #1679: obtain the caption from the chunk option `tab.cap` for `kable()` also try the chunk option tbl.cap when tab.cap is NULL (quarto-dev/quarto-cli#7555) tweak R Markdown v1 vignettes move mailing list link and use https in ref card move css and js to jsdelivr for html_vignette use jsdelivr for the Rhtml template rewrite the docco classic style using JS instead of R standardize the docco linear format new version of funmediation is on CRAN now support the ... argument in chunk hooks optimize PNG images in package vignettes via optipng and pngquant if they are installed use R Markdown v1 for the knitr-intro vignette, too delete some files that are no longer needed in inst/examples and also ignore some files fix #2308: don't trim trailing spaces escaped by `\` support in-body chunk options for ojs and mermaid (quarto-dev/quarto-cli#7799) amend 3dcfac4780accc3791855b298a556297f62dc73d to fix quarto-dev/quarto-cli#5994: add YAML options to code for dot/mermaid/ojs chunks so that the full chunk content can be returned to Quarto add trailing slashes to URLs use the `assert(fact, {})` syntax for all tests revert c9473ad: map the chunk option `tbl-cap` to `tab.cap` leave tbl.cap alone; don't convert it to tab.cap, since Quarto has its own special handling of `tbl-cap` Create FUNDING.yml use xfun::decimal_dot() to ensure dot as the decimal separator fix rstudio/rmarkdown#2525: ensure the dot is used as the decimal separator even when options(OutDec) is not `.` or `LC_NUMERIC` is inappropriate factor out code to xfun::csv_options() and xfun::divide_chunk() get_option_comment() has been moved to xfun roxygenize bump xfun version xfun 0.42 is on CRAN now revert 87d094a6c593c31a3667821865e91b4a530018ec per request from CRAN maintainers, since _R_CHECK_VIGNETTES_SKIP_RUN_MAYBE_=true has been made the default fix rstudio/tinytex#435: adjust PATH temporarily for pdf_crop() to be able to find the command `pdfcrop` from TinyTeX RStudio IDE still calls parse_params(): https://github.com/rstudio/rstudio/blob/9a6196233d8eae5aa365b73eaafba04f7714190c/src/cpp/session/modules/SessionRmdNotebook.R#L666 a follow-up on #2331: use xfun::fenced_block() from yihui/xfun@22a97ce xfun 0.43 is on CRAN now not sure what's wrong with pak `knitr::imgur_upload()` is now simply a wrapper function of `xfun::upload_imgur()` (#2325) too many ways to do the same thing... drop support for `#-` in spin() make spin() work again with input that can't be parsed as R code use xfun::check_old_package() markdown no longer sets this option internally, so no need to empty it now better detection of Rmd v2 input in knit2html(), so it no longer warns against documents that use markdown:: or litedown:: output formats make regex a little stricter so it won't match rmarkdown:: the loo issue has been fixed (#2306) roxygen2 requires _PACKAGE now rename class names 'block' to 'knitr_block', and 'inline' to 'knitr_inline' since I need to export the print() methods and the names 'block' and 'inline' are too general preserve trailing \n in source code by doubling it, because later we will remove trailing \n in fenced_block() a temporary workaround for davidgohel/flextable#621 StructFDR has been updated on CRAN but unfortunately the maintainer didn't seem to have seen my email about #2306 I can't use knitr_block/knitr_inline as class names since it would break the lightparser package; let me just get rid of these S3 methods, which are unnecessarily advanced---just use normal functions instead (i.e., use inherits() to do the dispatch by myself) CRAN release v1.46 knokknok (1): fix #2318: faster processing of dependencies in dep_auto() (#2321)
David Cser (1): Update themes to be consistent with Andrew Simon's highlight. (#2341) Yihui Xie (15): just break the rest of packages in #2306 (CRAN will be fine with the breakage since I have notified package maintainers multiple times and well in advance) use options(knitr.kable.max_rows) for kable() to control the maximum number of rows to be generated in the table factor out the code to divide input lines into code/text chunks add news for d0d1b47 since some package authors have been puzzled by `R CMD check` failures find_globals() has been moved to xfun long ago 301 redirect adjust test for xfun 0.44 handle_error() in xfun 0.44 requires only one argument in the handler function use internal functions find_globals() and find_locals() in xfun 0.44 flextable 0.9.6 is on CRAN; presumably this hack can be removed now (davidgohel/flextable#621) fix #2343: remove anything after comma or white spaces (including \n) in package URL disable tangle for vignettes highr 0.11 is on CRAN there are packages that rely on \hlstr and \hlstd commands (such as FuzzyNumbers and pandocfilters), so define them for backward compatibility CRAN release v1.47 atusy (1): close #2335: escape & in as many fields as possible in write_bib() (#2342)
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To reproduce,
remotes::install_github('yihui/knitr')
and run tests in flextable or doR CMD check
:This is due to a change in
knitr::raw_block()
: yihui/knitr@5435c52#diff-60bef5af43a1bd541299ce9bceeb226afb23deaa5e637b145c85e05ffd552b0cPreviously,
knitr::raw_block()
always uses three backticks in the fences. Now it will look at its content first. If the content contains three backticks, it will use four in the fences. I didn't look closely into the flextable codebase, but I guess it might be easier for you to figure out a proper fix. The above tests were failing because they generated something like this:which should have been
Thanks!
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