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Bio: integrate YAMDA motif search tool #1433

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vdyma opened this issue Dec 29, 2022 · 0 comments
Closed

Bio: integrate YAMDA motif search tool #1433

vdyma opened this issue Dec 29, 2022 · 0 comments
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documentation Improvements or additions to documentation enhancement New feature or request tests Writing new or modifying new tests

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vdyma commented Dec 29, 2022

Open-source tool YAMDA provides hardware-accelerated tools for motif search on DNA sequences, however it doesn't support motif search in DNA and protein sequences (daquang/YAMDA#13). Packages such as Peptides would benefit greatly from this tool.
@vdyma vdyma added documentation Improvements or additions to documentation enhancement New feature or request tests Writing new or modifying new tests labels Dec 29, 2022
@vdyma vdyma self-assigned this Dec 29, 2022
@vdyma vdyma moved this to In Progress in Macromolecules Jan 5, 2023
@vdyma vdyma closed this as not planned Won't fix, can't repro, duplicate, stale Apr 21, 2023
@github-project-automation github-project-automation bot moved this from In Progress to Done in Macromolecules Apr 21, 2023
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documentation Improvements or additions to documentation enhancement New feature or request tests Writing new or modifying new tests
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