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add snowflake and redshift to ci tests
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@@ -4,7 +4,7 @@ on: | |
| pull_request: | ||
| branches: [main, master] | ||
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| name: Postgres-test | ||
| name: postgres-test | ||
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| jobs: | ||
| R-CMD-check: | ||
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,60 @@ | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: [main, master] | ||
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| name: redshift-test | ||
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| jobs: | ||
| R-CMD-check: | ||
| if: github.repository == 'darwin-eu/CDMConnector' | ||
| runs-on: ${{ matrix.config.os }} | ||
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| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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| strategy: | ||
| fail-fast: true | ||
| matrix: | ||
| config: | ||
| - {os: macOS-latest, r: 'release'} | ||
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| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
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| steps: | ||
| - uses: actions/checkout@v2 | ||
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| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| r-version: ${{ matrix.config.r }} | ||
| http-user-agent: ${{ matrix.config.http-user-agent }} | ||
| use-public-rspm: true | ||
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| - name: Install suggested packages | ||
| run: | | ||
| install.packages("DatabaseConnector") | ||
| install.packages("RPostgres") | ||
| install.packages("testthat") | ||
| shell: Rscript {0} | ||
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| - name: Install CirceR | ||
| run: | | ||
| install.packages("rJava") | ||
| install.packages("RJSONIO") | ||
| install.packages("CirceR", repos = "https://OHDSI.github.io/drat", type = "source") | ||
| install.packages("Capr", repos = "https://OHDSI.github.io/drat", type = "source") | ||
| shell: Rscript {0} | ||
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| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| dependencies: '"hard"' | ||
| extra-packages: any::rcmdcheck | ||
| needs: check | ||
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| - name: Run tests on redshift with RPostgres driver | ||
| run: | | ||
| withr::with_envvar(new = c("CI_TEST_DB" = "redshift"), testthat::test_local()) | ||
| shell: Rscript {0} | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,59 @@ | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: [main, master] | ||
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| name: snowflake-odbc-test | ||
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| jobs: | ||
| R-CMD-check: | ||
| if: github.repository == 'darwin-eu/CDMConnector' | ||
| runs-on: ${{ matrix.config.os }} | ||
|
|
||
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
|
|
||
| strategy: | ||
| fail-fast: true | ||
| matrix: | ||
| config: | ||
| - {os: macOS-latest, r: 'release'} | ||
|
|
||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
|
|
||
| steps: | ||
| - uses: actions/checkout@v2 | ||
|
|
||
| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| r-version: ${{ matrix.config.r }} | ||
| http-user-agent: ${{ matrix.config.http-user-agent }} | ||
| use-public-rspm: true | ||
|
|
||
| - name: Install suggested packages | ||
| run: | | ||
| install.packages("DatabaseConnector") | ||
| install.packages("testthat") | ||
| shell: Rscript {0} | ||
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| - name: Install CirceR | ||
| run: | | ||
| install.packages("rJava") | ||
| install.packages("RJSONIO") | ||
| install.packages("CirceR", repos = "https://OHDSI.github.io/drat", type = "source") | ||
| install.packages("Capr", repos = "https://OHDSI.github.io/drat", type = "source") | ||
| shell: Rscript {0} | ||
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| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| dependencies: '"hard"' | ||
| extra-packages: any::rcmdcheck | ||
| needs: check | ||
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| - name: Run tests on Snowflake with odbc driver | ||
| run: | | ||
| withr::with_envvar(new = c("CI_TEST_DB" = "snowflake"), testthat::test_local()) | ||
| shell: Rscript {0} | ||
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