install package prior to running github tests

darwin-eu · Jan 16, 2024 · 1b8968a · 1b8968a
1 parent 3bf64f7
commit 1b8968a
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Showing 3 changed files with 9 additions and 14 deletions.
diff --git a/.github/workflows/postgres-test.yaml b/.github/workflows/postgres-test.yaml
@@ -45,6 +45,6 @@ jobs:
         shell: Rscript {0}
 
       - name: Run tests on postgres with RPostgres driver
-        run: R -e 'withr::with_envvar(new = c("CI_TEST_DB" = "postgres"), testthat::test_local())'
+        run: R -e 'devtools::install(); withr::with_envvar(new = c("CI_TEST_DB" = "postgres"), testthat::test_local())'
 
 
diff --git a/tests/testthat/setup.R b/tests/testthat/setup.R
@@ -166,15 +166,15 @@ ciTestDbs <- c("duckdb", "postgres", "redshift", "sqlserver", "snowflake")
 if (Sys.getenv("CI_TEST_DB") == "") {
 
   dbToTest <- c(
-    "duckdb"
-    ,
+    # "duckdb"
+    # ,
     "postgres"
-    ,
-    "redshift"
-    ,
-    "sqlserver"
-    ,
-    "snowflake"
+    # ,
+    # "redshift"
+    # ,
+    # "sqlserver"
+    # ,
+    # "snowflake"
     # ,
     # "spark"
   )

diff --git a/tests/testthat/test-db-generateConceptCohortSet.R b/tests/testthat/test-db-generateConceptCohortSet.R
@@ -1,9 +1,4 @@
 test_generate_concept_cohort_set <- function(con, cdm_schema, write_schema) {
-  # if (dbms(con) == "bigquery") return(skip("failing test"))
-
-  if (dbms(con) == "bigquery") {
-    return(skip("failing test"))
-  }
 
   # withr::local_options("CDMConnector.cohort_as_temp" = FALSE) # temp cohort tables are not implemented yet
   cdm <- cdm_from_con(con,