ChestImagingPlatform

The Brigham and Women's Hospital (BWH) Applied Chest Imaging Lab's (ACIL) Chest Imaging Platform private repository

Dependencies

• ITK
• VTK (must build with boost for airway generation labeling)
• boost (needed for airway generation labeling)
• teem
• FLTK (needed for ACILAssistant)

Python Dependencies

• numpy
• scipy
• pynrrd
• pandas
• cython
• nose

Information for Users

We are happy to receive questions, comments, bug reports, etc. Please post any questions to [email protected]

Information for Developers

Commit Codes

The following codes should prepend comments to commits

• ENH: Source code enhancment
• DEB: A bug fix
• COMP: A change needed to get the source to compile/link
• STYLE: Style change
• ADD: Addition of a new file or directory to the repository

Coding Conventions

For C++ code, we follow [ITK Coding Style Guide] 1. For python code, we follow the [PEP 8 - Style Guide for Python Code] 2. Highlights and additional ChestImagingPlatform-specifc guidelines for C++ code are as follows

• Avoid white space immediately inside brackets, braces and parentheses
• Avoid white space immediately before a comma, semicolon, or colon
• Don't use spaces around the = sign when used to indicate a keyword argument or a default parameter value
• Use '//' for each line of a comment block, followed by a space, followed by a capitalized letter if beginning a sentence or phrase. This pertains to comments not meant to appear in the documentation.
• Follow Doxygen style comments as per recommendations in the [ITK Coding Style Guide] 1 where appropriate
• Use one space immediately before and after: +, -, <<, >>, &&, ||, +=, *=, -=, =, ==, <, >, =
• No white space should be used for operators * and /