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adjust cat12 output space to MNI152NLin2009cAsym #80

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adjust cat12 output space to MNI152NLin2009cAsym #80

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11 changes: 5 additions & 6 deletions src/spm_2_bids.m
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Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@
% :param verbose: boolean
%
% :returns: - :new_filename: (string) BIDS compatible filename
% for example ``sub-01_ses-01_space-IXI549Space_desc-preproc_T1w.nii``;
% for example ``sub-01_ses-01_space-MNI152NLin2009cAsym_desc-preproc_T1w.nii``;
% - :pth: (string) relative BIDS path
% for example ``sub-01/ses-01``
% - :json: (structure) JSON derivatives content
Expand Down Expand Up @@ -185,11 +185,10 @@
content = rmfield(content, 'Sources');
end

if isfield(bf.entities, 'space') && strcmp(bf.entities.space, 'IXI549Space')
content.SpatialReference = struct('IXI549Space', ...
['Reference space defined by the average ', ...
'of the ''549 subjects from the IXI dataset'' ', ...
'linearly transformed to ICBM MNI 452.']);
if isfield(bf.entities, 'space') && strcmp(bf.entities.space, 'space-MNI152NLin2009cAsym')
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content.SpatialReference = struct('space-MNI152NLin2009cAsym', ...

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['ICBM 152 Nonlinear Asymmetrical template version 2009c ', ...
'http://nist.mni.mcgill.ca/?p=904']);
end

json.content = content;
Expand Down