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BQ.1.1 sublineage with S:K147E, S:H207R (51 seq., Canada, Japan, Spain, USA) #1740

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agamedilab opened this issue Mar 9, 2023 · 3 comments
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@agamedilab
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Proposal for a sublineage of BQ.1.1
Earliest sequence: 12.12.2022 (Canada)
Countries detected: Canada, Japan, Spain, USA

Defining mutation:
S:K147E=A22001G
S:H207R=A22182G
T10441C
T16533C

Gisaid query: A22001G, A22182G, T10441C, T16533C

This recent sublineage of BQ.1.1 is defined by S:K147E, S:H207R and was found in Canada, Japan, Spain, USA so far.

grafik
https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_d9b6_98cb90.json?c=country

grafik

EPI_ISL_16242509, EPI_ISL_16306398, EPI_ISL_16306814, EPI_ISL_16459922, EPI_ISL_16489608, EPI_ISL_16489609, EPI_ISL_16489910, EPI_ISL_16495046, EPI_ISL_16510053, EPI_ISL_16690056, EPI_ISL_16732139, EPI_ISL_16747887, EPI_ISL_16837611, EPI_ISL_16869921, EPI_ISL_16869922, EPI_ISL_16869923, EPI_ISL_16869924, EPI_ISL_16869925, EPI_ISL_16869926, EPI_ISL_16869927, EPI_ISL_16869928, EPI_ISL_16869929, EPI_ISL_16869930, EPI_ISL_16869931, EPI_ISL_16869932, EPI_ISL_16869943, EPI_ISL_16973229, EPI_ISL_16974427, EPI_ISL_16986032, EPI_ISL_16986034, EPI_ISL_16989714, EPI_ISL_16989795, EPI_ISL_17034629, EPI_ISL_17056864, EPI_ISL_17063901, EPI_ISL_17063924, EPI_ISL_17085539, EPI_ISL_17085584, EPI_ISL_17085716, EPI_ISL_17152963, EPI_ISL_17152964, EPI_ISL_17152965

OQ295125.1
OQ399325.1

@FedeGueli
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FedeGueli commented Mar 9, 2023

Nice catch i spotted that H207R too in Quebec but didnt analyze it further.

@agamedilab agamedilab changed the title BQ.1.1 sublineage with S:K147E, S:H207R (44 seq., Canada, Japan, Spain, USA) BQ.1.1 sublineage with S:K147E, S:H207R (51 seq., Canada, Japan, Spain, USA) Mar 24, 2023
@corneliusroemer corneliusroemer added the monitor currently too small, watch for future developments label Mar 24, 2023
@InfrPopGen InfrPopGen self-assigned this Apr 3, 2023
InfrPopGen added a commit that referenced this issue Apr 3, 2023
Added new lineage BQ.1.1.73 from #1740 with 47 new sequence designations, and 3 updated from BQ.1.1
@InfrPopGen InfrPopGen added designated and removed monitor currently too small, watch for future developments labels Apr 3, 2023
@InfrPopGen InfrPopGen added this to the BQ.1.1.73 milestone Apr 3, 2023
@InfrPopGen
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Thanks for submitting. We've added lineage BQ.1.1.73 with 47 newly designated sequences, and 3 updated from BQ.1.1. Defining mutations A22182G (S:H207R), T10441C, T16533C (following A22001G (S:K147E)).

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