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Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (30 sequences as of 2023-02-12) #1567

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c19850727 opened this issue Jan 21, 2023 · 1 comment
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designated recombinant recombinant proposal
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@c19850727
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This is the 5th BA.2.75* x BQ.1* recombinant cluster recently emerged, along with #1393 , #1425 , #1444 and #1543 . Again this recombinant has a breakpoint at RBD.

Description

Recombinant between: BA.2.75* and BQ.1* (with S:R346T)
Earliest sequence: 2022/11/08 (Malaysia)
Most recent sequence: 2023/01/11 (UK-England)
Countries circulating: Malaysia (2/23), Austria (2/23), UK-England (19/23)
Mutation profile (private mutations are in yellow color):
image
Private mutations: C2842T, C6982T, T20748C
GISAID and Cov-spectrum query: C2842T, T20748C, C6982T, G22599C, G28681T

Evidence

Usher tree:
image

Genomes:

EPI_ISL_15788741, EPI_ISL_16192316, EPI_ISL_16192386, EPI_ISL_16240175, EPI_ISL_16375075, EPI_ISL_16440063, EPI_ISL_16485159, EPI_ISL_16535451, EPI_ISL_16535484, EPI_ISL_16535553, EPI_ISL_16535793, EPI_ISL_16560625, EPI_ISL_16560631, EPI_ISL_16560638, EPI_ISL_16560655, EPI_ISL_16560672, EPI_ISL_16560689, EPI_ISL_16560753, EPI_ISL_16560772, EPI_ISL_16560807, EPI_ISL_16560838, EPI_ISL_16586020, EPI_ISL_16586182

@thomasppeacock thomasppeacock added the recombinant recombinant proposal label Jan 21, 2023
@c19850727 c19850727 changed the title Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (23 sequences as of 2023-01-20) Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (25 sequences as of 2023-01-24) Jan 24, 2023
@c19850727 c19850727 changed the title Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (25 sequences as of 2023-01-24) Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (26 sequences as of 2023-01-29) Jan 29, 2023
@c19850727 c19850727 changed the title Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (26 sequences as of 2023-01-29) Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (27 sequences as of 2023-02-08) Feb 9, 2023
@c19850727 c19850727 changed the title Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (27 sequences as of 2023-02-08) Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (28 sequences as of 2023-02-09) Feb 9, 2023
@c19850727 c19850727 changed the title Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (28 sequences as of 2023-02-09) Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (29 sequences as of 2023-02-10) Feb 10, 2023
@c19850727 c19850727 changed the title Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (29 sequences as of 2023-02-10) Yet another BA.2.75* x BQ.1.* recombinant with RBD breakpoint (30 sequences as of 2023-02-12) Feb 13, 2023
@corneliusroemer corneliusroemer added this to the XBS milestone Feb 19, 2023
@JosetteSchoenma
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