Update via Issue Milestone Collector

cov-lineages · Oct 15, 2023 · b77496f · b77496f
1 parent a772bd3
commit b77496f
Show file tree

Hide file tree

Showing 4 changed files with 62 additions and 12 deletions.
diff --git a/scripts/issue-milestone-collector/README.md b/scripts/issue-milestone-collector/README.md
@@ -980,8 +980,8 @@ PANGO | UNALIASED PANGO | MILESTONE | ISSUE | LABELS | REPO
 `JE.1` | `XBB.2.3.3.1.2.1.1` | [⚑ 77](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/77?closed=1) | [#597](https://github.com/sars-cov-2-variants/lineage-proposals/issues/597) | [S:478](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A478), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:450](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A450), [combo](https://github.com/sars-cov-2-variants/lineage-proposals/labels/combo) | 2nd
 `JE.1.1` | `XBB.2.3.3.1.2.1.1.1` | [⚑ 141](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/141?closed=1) | [#827](https://github.com/sars-cov-2-variants/lineage-proposals/issues/827) | [S:478](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A478), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:521](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A521), [S:450](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A450), [S:52](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A52) | 2nd
 `GJ.1.2.5` | `XBB.2.3.3.1.2.5` | [⚑ 116](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/116?closed=1) | [#628](https://github.com/sars-cov-2-variants/lineage-proposals/issues/628) | [New mutations](https://github.com/sars-cov-2-variants/lineage-proposals/labels/New%20mutations), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated) | 2nd
-`GJ.1.2.6` | `XBB.2.3.3.1.2.6` | [⚑ 142](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/142?closed=1) | [#726 🟠](https://github.com/sars-cov-2-variants/lineage-proposals/issues/726) | [S:478](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A478), [Multiple lineages](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Multiple%20lineages), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:521](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A521), [partially designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/partially%20designated) | 2nd
-`GJ.1.2.7` | `XBB.2.3.3.1.2.7` | [⚑ 142](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/142?closed=1) | [#726 🟠](https://github.com/sars-cov-2-variants/lineage-proposals/issues/726) | [S:478](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A478), [Multiple lineages](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Multiple%20lineages), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:521](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A521), [partially designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/partially%20designated) | 2nd
+`GJ.1.2.6` | `XBB.2.3.3.1.2.6` | [⚑ 142](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/142?closed=1) | [#726](https://github.com/sars-cov-2-variants/lineage-proposals/issues/726) | [S:478](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A478), [Multiple lineages](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Multiple%20lineages), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:521](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A521), [partially designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/partially%20designated) | 2nd
+`GJ.1.2.7` | `XBB.2.3.3.1.2.7` | [⚑ 142](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/142?closed=1) | [#726](https://github.com/sars-cov-2-variants/lineage-proposals/issues/726) | [S:478](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A478), [Multiple lineages](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Multiple%20lineages), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:521](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A521), [partially designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/partially%20designated) | 2nd
 `GJ.5` | `XBB.2.3.3.5` | [⚑ 140](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/140?closed=1) | [#429](https://github.com/sars-cov-2-variants/lineage-proposals/issues/429) | [S:478](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A478), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated) | 2nd
 `GJ.5.1` | `XBB.2.3.3.5.1` | [⚑ 140](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/140?closed=1) | [#429](https://github.com/sars-cov-2-variants/lineage-proposals/issues/429) | [S:478](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A478), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated) | 2nd
 `XBB.2.3.4` | `XBB.2.3.4` | [⚑ 723](https://github.com/cov-lineages/pango-designation/milestone/723?closed=1) | [#1822](https://github.com/cov-lineages/pango-designation/issues/1822) | https://github.com/cov-lineages/pango-designation/labels/XBB | main
@@ -998,6 +998,8 @@ PANGO | UNALIASED PANGO | MILESTONE | ISSUE | LABELS | REPO
 `XBC.1.6` | `XBC.1.6` | [⚑ 682](https://github.com/cov-lineages/pango-designation/milestone/682?closed=1) | [#1755](https://github.com/cov-lineages/pango-designation/issues/1755) | https://github.com/cov-lineages/pango-designation/labels/designated https://github.com/cov-lineages/pango-designation/labels/recommended https://github.com/cov-lineages/pango-designation/labels/recombinant%20sublineage | main
 `HW.1` | `XBC.1.6.3.1` | [⚑ 58](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/58?closed=1) | [#71](https://github.com/sars-cov-2-variants/lineage-proposals/issues/71) | [To be proposed](https://github.com/sars-cov-2-variants/lineage-proposals/labels/To%20be%20proposed), [Stepwise evolution](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Stepwise%20evolution) | 2nd
 `HW.1.1` | `XBC.1.6.3.1.1` | [⚑ 54](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/54?closed=1) | [#452](https://github.com/sars-cov-2-variants/lineage-proposals/issues/452) | [New mutations](https://github.com/sars-cov-2-variants/lineage-proposals/labels/New%20mutations), [Rapid review needed](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Rapid%20review%20needed), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated) | 2nd
+`XBC.1.6.5` | `XBC.1.6.5` | [⚑ 165](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/165?closed=1) | [#479](https://github.com/sars-cov-2-variants/lineage-proposals/issues/479) | [Truncated Orf(3-10)](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Truncated%20Orf(3-10)), [Apparently slow](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Apparently%20slow), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated) | 2nd
+`JT.1` | `XBC.1.6.6.1` | [⚑ 164](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/164?closed=1) | [#203](https://github.com/sars-cov-2-variants/lineage-proposals/issues/203) | [Convergent evolution](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Convergent%20evolution), [Apparently slow](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Apparently%20slow), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:445](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A445) | 2nd
 `XBC.2.1` | `XBC.2.1` | [⚑ 694](https://github.com/cov-lineages/pango-designation/milestone/694?closed=1) | [#1538](https://github.com/cov-lineages/pango-designation/issues/1538) | https://github.com/cov-lineages/pango-designation/labels/designated https://github.com/cov-lineages/pango-designation/labels/recombinant%20sublineage | main
 `XBD` | `XBD` | [⚑ 504](https://github.com/cov-lineages/pango-designation/milestone/504?closed=1) | [#1137](https://github.com/cov-lineages/pango-designation/issues/1137) | https://github.com/cov-lineages/pango-designation/labels/recommended https://github.com/cov-lineages/pango-designation/labels/recombinant | main
 `XBE` | `XBE` | [⚑ 522](https://github.com/cov-lineages/pango-designation/milestone/522?closed=1) | [#1246](https://github.com/cov-lineages/pango-designation/issues/1246) | https://github.com/cov-lineages/pango-designation/labels/designated https://github.com/cov-lineages/pango-designation/labels/recombinant | main

diff --git a/scripts/issue-milestone-collector/data/mappings.json b/scripts/issue-milestone-collector/data/mappings.json
@@ -11736,8 +11736,8 @@
       "milestone": 142,
       "issue": 726,
       "labels": "S:478, Multiple lineages, designated, S:521, partially designated",
-      "state": "OPEN",
-      "reason": null,
+      "state": "CLOSED",
+      "reason": "COMPLETED",
       "unaliased": "XBB.2.3.3.1.2.6"
     }
   ],
@@ -11748,8 +11748,8 @@
       "milestone": 142,
       "issue": 726,
       "labels": "S:478, Multiple lineages, designated, S:521, partially designated",
-      "state": "OPEN",
-      "reason": null,
+      "state": "CLOSED",
+      "reason": "COMPLETED",
       "unaliased": "XBB.2.3.3.1.2.7"
     }
   ],
@@ -11945,6 +11945,30 @@
       "unaliased": "XBC.1.6.3.1.1"
     }
   ],
+  "XBC.1.6.5": [
+    {
+      "pango": "XBC.1.6.5",
+      "repo": "sars-cov-2-variants/lineage-proposals",
+      "milestone": 165,
+      "issue": 479,
+      "labels": "Truncated Orf(3-10), Apparently slow, designated",
+      "state": "CLOSED",
+      "reason": "COMPLETED",
+      "unaliased": "XBC.1.6.5"
+    }
+  ],
+  "XBC.1.6.6.1": [
+    {
+      "pango": "JT.1",
+      "repo": "sars-cov-2-variants/lineage-proposals",
+      "milestone": 164,
+      "issue": 203,
+      "labels": "Convergent evolution, Apparently slow, designated, S:445",
+      "state": "CLOSED",
+      "reason": "COMPLETED",
+      "unaliased": "XBC.1.6.6.1"
+    }
+  ],
   "XBC.2.1": [
     {
       "pango": "XBC.2.1",

diff --git a/scripts/issue-milestone-collector/data/mappings.tsv b/scripts/issue-milestone-collector/data/mappings.tsv
@@ -979,8 +979,8 @@ GJ.1.2.1	sars-cov-2-variants/lineage-proposals	56	446	Rapid review needed, desig
 JE.1	sars-cov-2-variants/lineage-proposals	77	597	S:478, designated, S:450, combo	CLOSED	COMPLETED	XBB.2.3.3.1.2.1.1
 JE.1.1	sars-cov-2-variants/lineage-proposals	141	827	S:478, designated, S:521, S:450, S:52	CLOSED	COMPLETED	XBB.2.3.3.1.2.1.1.1
 GJ.1.2.5	sars-cov-2-variants/lineage-proposals	116	628	New mutations, designated	CLOSED	COMPLETED	XBB.2.3.3.1.2.5
-GJ.1.2.6	sars-cov-2-variants/lineage-proposals	142	726	S:478, Multiple lineages, designated, S:521, partially designated	OPEN		XBB.2.3.3.1.2.6
-GJ.1.2.7	sars-cov-2-variants/lineage-proposals	142	726	S:478, Multiple lineages, designated, S:521, partially designated	OPEN		XBB.2.3.3.1.2.7
+GJ.1.2.6	sars-cov-2-variants/lineage-proposals	142	726	S:478, Multiple lineages, designated, S:521, partially designated	CLOSED	COMPLETED	XBB.2.3.3.1.2.6
+GJ.1.2.7	sars-cov-2-variants/lineage-proposals	142	726	S:478, Multiple lineages, designated, S:521, partially designated	CLOSED	COMPLETED	XBB.2.3.3.1.2.7
 GJ.5	sars-cov-2-variants/lineage-proposals	140	429	S:478, designated	CLOSED	COMPLETED	XBB.2.3.3.5
 GJ.5.1	sars-cov-2-variants/lineage-proposals	140	429	S:478, designated	CLOSED	COMPLETED	XBB.2.3.3.5.1
 XBB.2.3.4	cov-lineages/pango-designation	723	1822	XBB	CLOSED	COMPLETED	XBB.2.3.4
@@ -997,6 +997,8 @@ XBC.1.5	cov-lineages/pango-designation	669	1671	designated	CLOSED	COMPLETED	XBC.
 XBC.1.6	cov-lineages/pango-designation	682	1755	designated, recommended, recombinant sublineage	CLOSED	COMPLETED	XBC.1.6
 HW.1	sars-cov-2-variants/lineage-proposals	58	71	To be proposed, Stepwise evolution	CLOSED	COMPLETED	XBC.1.6.3.1
 HW.1.1	sars-cov-2-variants/lineage-proposals	54	452	New mutations, Rapid review needed, designated	CLOSED	COMPLETED	XBC.1.6.3.1.1
+XBC.1.6.5	sars-cov-2-variants/lineage-proposals	165	479	Truncated Orf(3-10), Apparently slow, designated	CLOSED	COMPLETED	XBC.1.6.5
+JT.1	sars-cov-2-variants/lineage-proposals	164	203	Convergent evolution, Apparently slow, designated, S:445	CLOSED	COMPLETED	XBC.1.6.6.1
 XBC.2.1	cov-lineages/pango-designation	694	1538	designated, recombinant sublineage	CLOSED	COMPLETED	XBC.2.1
 XBD	cov-lineages/pango-designation	504	1137	recommended, recombinant	CLOSED	COMPLETED	XBD
 XBE	cov-lineages/pango-designation	522	1246	designated, recombinant	CLOSED	COMPLETED	XBE

diff --git a/...-milestone-collector/github-artifacts/mappings/sars-cov-2-variants_lineage-proposals.json b/...-milestone-collector/github-artifacts/mappings/sars-cov-2-variants_lineage-proposals.json
@@ -1513,8 +1513,8 @@
       "milestone": 142,
       "issue": 726,
       "labels": "S:478, Multiple lineages, designated, S:521, partially designated",
-      "state": "OPEN",
-      "reason": null
+      "state": "CLOSED",
+      "reason": "COMPLETED"
     }
   ],
   "XBB.2.3.3.1.2.7": [
@@ -1524,8 +1524,8 @@
       "milestone": 142,
       "issue": 726,
       "labels": "S:478, Multiple lineages, designated, S:521, partially designated",
-      "state": "OPEN",
-      "reason": null
+      "state": "CLOSED",
+      "reason": "COMPLETED"
     }
   ],
   "XBB.1.5.102.1.1.3": [
@@ -1791,5 +1791,27 @@
       "state": "CLOSED",
       "reason": "COMPLETED"
     }
+  ],
+  "XBC.1.6.6.1": [
+    {
+      "pango": "JT.1",
+      "repo": "sars-cov-2-variants/lineage-proposals",
+      "milestone": 164,
+      "issue": 203,
+      "labels": "Convergent evolution, Apparently slow, designated, S:445",
+      "state": "CLOSED",
+      "reason": "COMPLETED"
+    }
+  ],
+  "XBC.1.6.5": [
+    {
+      "pango": "XBC.1.6.5",
+      "repo": "sars-cov-2-variants/lineage-proposals",
+      "milestone": 165,
+      "issue": 479,
+      "labels": "Truncated Orf(3-10), Apparently slow, designated",
+      "state": "CLOSED",
+      "reason": "COMPLETED"
+    }
   ]
 }