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Added lineages XBB.1.18 (A8001G) and XBB.1.18.1 (S:S486P)
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Note for @AngieHinrichs: you need to regraft the XBB.1.18.1 branch
It is currently placed in XBB.1.5 on the 17124 branch
I'm pretty sure that the XBB.1.18.1 samples derive from XBB.1.18
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@corneliusroemer
corneliusroemer committed Mar 18, 2023
1 parent d08a99c commit 3b74521
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2 comments on commit 3b74521

@AngieHinrichs
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I agree but unfortunately this is not the common case where temporarily removing some sequences and reoptimizing will work. I need a proper regrafting util. Looking into it.

@FedeGueli
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Yes the real tree of XBB.1.18 is this one: https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice6_genome_1e56b_ee16d0.json?c=gt-nuc_17124&label=id:node_7742010 while the entire branch with S:F486P is displaced to : https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_2f8dd_ee8730.json?label=id:node_7762030

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