add taplo recipe #375
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# Run unit tests from the ground up | |
# installing "pycontrails" into the Github OS environments | |
# TODO: Include windows platforms testing here | |
name: Unit tests | |
on: | |
# run on push to main | |
push: | |
branches: | |
- main | |
# run on all PRs | |
pull_request: | |
# Allows run manually from the Actions tab | |
workflow_dispatch: | |
# Run if a release is published | |
workflow_call: | |
# Global variables | |
env: | |
PYCONTRAILS_CACHE_DIR: '${{ github.workspace }}/.cache/pycontrails' | |
BADA_CACHE_DIR: '${{ github.workspace }}/.cache/bada/' | |
# This allows a subsequently queued workflow run to interrupt previous runs | |
concurrency: | |
group: '${{ github.workflow }} @ ${{ github.event.pull_request.head.label || github.head_ref || github.ref }}' | |
cancel-in-progress: true | |
jobs: | |
unit-test: | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-latest, windows-latest] | |
pyversion: ['3.9', '3.10', '3.11'] | |
runs-on: ${{ matrix.os }} | |
# set from https://github.com/google-github-actions/auth | |
permissions: | |
contents: 'read' | |
id-token: 'write' | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.pyversion }} | |
cache: 'pip' | |
cache-dependency-path: pyproject.toml | |
- name: Cache mypy and pytest | |
id: cache-test | |
uses: actions/cache@v3 | |
with: | |
# Note the caches are specific to branches, so we don't need to specify here | |
# https://docs.github.com/en/actions/using-workflows/caching-dependencies-to-speed-up-workflows#restrictions-for-accessing-a-cache | |
key: ${{ runner.os }}-mypy-pytest | |
path: | | |
${{ github.workspace }}/.mypy_cache | |
${{ github.workspace }}/.pytest_cache | |
- name: 'Authenticate to Google Cloud' | |
uses: 'google-github-actions/auth@v1' | |
with: | |
credentials_json: '${{ secrets.GCP_SERVICE_ACCOUNT }}' | |
- name: 'Set up Cloud SDK' | |
uses: 'google-github-actions/setup-gcloud@v1' | |
# download BADA files for testing | |
- name: BADA files | |
run: | | |
mkdir -p ${{ env.BADA_CACHE_DIR }} | |
gcloud storage cp -r gs://contrails-301217-bada/bada/bada3 ${{ env.BADA_CACHE_DIR }} | |
gcloud storage cp -r gs://contrails-301217-bada/bada/bada4 ${{ env.BADA_CACHE_DIR }} | |
ls -l ${{ env.BADA_CACHE_DIR }} | |
- name: Install pycontrails (dev) | |
run: | | |
pip install -U pip wheel | |
pip install -e .[complete,dev,docs] --verbose | |
# In latest-windows, redirecting stdout to a file uses utf-16 encoding | |
# This gives an error when ssh tries to read the key | |
# Instead don't pre-create the known_hosts file | |
- name: Install pycontrails-bada - windows | |
if: ${{ matrix.os == 'windows-latest' }} | |
run: | | |
mkdir -p $HOME/.ssh/ | |
gcloud secrets versions access latest --secret="contrails-301217-github-ssh-key" --out-file="$HOME/.ssh/id_rsa" | |
pip install "pycontrails-bada @ git+ssh://[email protected]/contrailcirrus/pycontrails-bada.git" | |
env: | |
GIT_SSH_COMMAND: "ssh -o StrictHostKeyChecking=no" | |
- name: Install pycontrails-bada - linux | |
if: ${{ matrix.os == 'ubuntu-latest' }} | |
run: | | |
mkdir -p $HOME/.ssh/ | |
ssh-keyscan github.com > $HOME/.ssh/known_hosts | |
gcloud secrets versions access latest --secret="contrails-301217-github-ssh-key" > $HOME/.ssh/id_rsa | |
chmod 600 $HOME/.ssh/id_rsa | |
pip install "pycontrails-bada @ git+ssh://[email protected]/contrailcirrus/pycontrails-bada.git" | |
- name: Show environment | |
run: | | |
pwd | |
ls -l . | |
ls -l pycontrails | |
python --version | |
mypy --version | |
pip list | |
- name: QC & Test | |
run: | | |
pip check | |
black pycontrails --check | |
ruff pycontrails tests | |
mypy pycontrails | |
pytest tests/unit -vv |