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build now uses the module name #1997

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merged 2 commits into from
May 3, 2024
Merged

build now uses the module name #1997

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1edfcfc
build now uses the module name
mr-c May 3, 2024
bb23b32
gh-actions: test on macos-13, not -latest
mr-c May 3, 2024
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2 changes: 1 addition & 1 deletion .github/workflows/ci-tests.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -266,7 +266,7 @@ jobs:

macos:
name: Test on macos-latest
runs-on: macos-latest
runs-on: macos-13 # not latest, that is now an Apple Silicon M1, for which seqtk is not yet built on bioconda
env:
TOXENV: py312-unit
steps:
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8 changes: 4 additions & 4 deletions release-test.sh
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Expand Up @@ -71,7 +71,7 @@ pushd src/${package}
pip install -rtest-requirements.txt build
make dist
#make test
cp dist/${package}*tar.gz ../../../testenv3/
cp dist/${module}*tar.gz ../../../testenv3/
pip uninstall -y ${package} || true; pip uninstall -y ${package} || true; make install
popd # ../.. no subdir named ${proj} here, safe for py.testing the installed module
# shellcheck disable=SC2086
Expand All @@ -87,13 +87,13 @@ source bin/activate
rm -f lib/python-wheels/setuptools* \
&& pip install --force-reinstall -U pip==${pipver} \
&& pip install setuptools==${setuptoolsver} wheel
package_tar=$(find . -name "${package}*tar.gz")
package_tar=$(find . -name "${module}*tar.gz")
pip install "-r${DIR}/test-requirements.txt" udocker build
pip install "${package_tar}${extras}"
udocker install
mkdir out
tar --extract --directory=out -z -f ${package}*.tar.gz
pushd out/${package}*
tar --extract --directory=out -z -f ${module}*.tar.gz
pushd out/${module}*
make dist
make test
pip install "-r${DIR}/mypy-requirements.txt"
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