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db: use DiskFileName for manifest files and memtables
These subsystems deal with on-disk files, using DiskFileName is more appropriate. This reduces the number of conversions in the code a lot. There are only a few `DiskFileName.FileName()` conversions left. We change `DiskFileNum` to be a `uint64` like `FileNum`, so that `DiskFileNum`s can also be compared and printed as integers.
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