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added recent publications to README
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cnellington committed Dec 28, 2023
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<a href="https://github.com/psf/black"><img alt="Code style: black" src="https://img.shields.io/badge/code%20style-black-000000.svg"></a>


A statistical machine learning toolbox for estimating models, distributions, and functions with context-specific parameters.
An easy-to-use machine learning toolbox for estimating models, distributions, and functions with context-specific parameters.

Context-specific parameters:
- Find hidden heterogeneity in data -- are all samples the same?
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<img src="https://contributors-img.web.app/image?repo=cnellington/contextualized" />
</a>

ContextualizedML was originally implemented by [Caleb Ellington](https://calebellington.com/) (CMU) and [Ben Lengerich](http://web.mit.edu/~blengeri/www) (MIT).
Contextualized ML was originally implemented by [Caleb Ellington](https://calebellington.com/) (CMU) and [Ben Lengerich](http://web.mit.edu/~blengeri/www) (MIT).

Many people have helped. Check out [ACKNOWLEDGEMENTS.md](https://github.com/cnellington/Contextualized/blob/main/ACKNOWLEDGEMENTS.md)!



## Related Publications and Pre-prints
- [Contextualized Machine Learning](https://arxiv.org/abs/2310.11340)
- [Contextualized Networks Reveal Heterogeneous Transcriptomic Regulation in Tumors at Sample-Specific Resolution](https://www.biorxiv.org/content/10.1101/2023.12.01.569658v1)
- [Contextualized Policy Recovery: Modeling and Interpreting Medical Decisions with Adaptive Imitation Learning](https://arxiv.org/abs/2310.07918)
- [Automated Interpretable Discovery of Heterogeneous Treatment Effectiveness: A COVID-19 Case Study](https://www.sciencedirect.com/science/article/pii/S1532046422001022)
- [NOTMAD: Estimating Bayesian Networks with Sample-Specific Structures and Parameters](http://arxiv.org/abs/2111.01104)
- [Discriminative Subtyping of Lung Cancers from Histopathology Images via Contextual Deep Learning](https://www.medrxiv.org/content/10.1101/2020.06.25.20140053v1.abstract)
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