GitHub - cmason-lab/nanopore_in

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
README		README
calc_identity.py		calc_identity.py
checkstats.sh		checkstats.sh
plot_all_current_distributions.py		plot_all_current_distributions.py
plot_current_distributions.py		plot_current_distributions.py
plot_dataset_sizes.py		plot_dataset_sizes.py
plot_graphmap_results.py		plot_graphmap_results.py
plot_id_by_species_readtype.py		plot_id_by_species_readtype.py
plot_quality_scores.py		plot_quality_scores.py
plot_stays_skips.py		plot_stays_skips.py
poretools_extract4stats.sh		poretools_extract4stats.sh
run_graphmap.sh		run_graphmap.sh
run_miniasm.sh		run_miniasm.sh
sort_fasta_for_ecoli_assembly.sh		sort_fasta_for_ecoli_assembly.sh
sort_fasta_for_nonhost_assembly.sh		sort_fasta_for_nonhost_assembly.sh

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Mason Lab nanopore analysis scripts for "Nanopore DNA Sequencing and Genome Assembly on the International Space Station" (Castro-Wallace, et al., 2017)