Pinned Loading

1. Cassis Cassis Public

   Detection and refinment of genomic rearrangement breakpoints

   Perl 1

2. SandraLouise/SVJedi-graph SandraLouise/SVJedi-graph Public

   SV genotyper for long reads with a variation graph

   Python 10

3. GATB/MindTheGap GATB/MindTheGap Public

   MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool.

   C++ 38 12

4. GATB/simka GATB/simka Public

   Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.

   C++ 46 10

5. GATB/DiscoSnp GATB/DiscoSnp Public

   DiscoSnp is designed for discovering all kinds of SNPs (not only isolated ones), as well as insertions and deletions, from raw set(s) of reads.

   Python 38 20

6. anne-gcd/MTG-Link anne-gcd/MTG-Link Public

   MTG-Link: Local assembly tool for linked-read data

   Python 3 1