Skip to content

Commit

Permalink
Updated Readme
Browse files Browse the repository at this point in the history
  • Loading branch information
mattjvincent committed Apr 8, 2023
1 parent 439cdf4 commit ea5578a
Showing 1 changed file with 6 additions and 6 deletions.
12 changes: 6 additions & 6 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -5,12 +5,10 @@ g2gtools
**g2gtools** creates custom genomes by incorporating SNPs and indels into reference genome, extracts regions of interest, e.g., exons or transcripts, , and converts coordinates of files (bam, gtf, bed) between two genomes. Unlike other liftover tools, g2gtools does not throw away alignments that land on indel regions. Release Version 0.2 can now create personal **diploid** genomes. The new version still lifts over diploid alignments on personal genome coordinates back to that of reference so we can compare alignments from among samples in a population.

* Free software: MIT License
* Documentation for Release Ver. 1.0.XX: http://churchill-lab.github.io/g2gtools/.
* Documentation for Release Ver. 1.0.XX: BELOW
* Documentation for Release Ver. 0.2.XX: http://churchill-lab.github.io/g2gtools/.
* Documentation for Release Ver. 0.1.XX: https://g2gtools.readthedocs.org.



Development Lead
----------------

Expand All @@ -22,9 +20,11 @@ Contributors

* Narayanan Raghupathy, The Jackson Laboratory <[email protected]>
* Anuj Srivastava, The Jackson Laboratory <[email protected]>
* Mike Lloyd, The Jackson Laboratory <[email protected]>

Docker
------------
A docker file is provided for easy build. We will also be pushing to DockerHub.

Reference
~~~~~~~~~
The main portion of this release was to upgrade to Python 3.x. Please reach out with any bugs you may encounter.

Manuscript in preparation (expected in 2018)

0 comments on commit ea5578a

Please sign in to comment.