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list python modules (non-std lib) required
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chrisgulvik committed Jul 26, 2018
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# mer-freq

#### Dependencies
- [Python 2.7.+](https://www.python.org)
- [Biopython 1.68+](https://biopython.org/)
- [NumPy](http://www.numpy.org/)
- [Pandas](https://pandas.pydata.org/)
- [regex](https://pypi.org/project/regex/)
- [SciPy](https://www.scipy.org/)

###### Database
- Merge split compressed files into single text file:
`cd db && cat 4mer_MCM.Bacteria.RefSeq.json.gz.0* | gunzip -c > 4mer_MCM.Bacteria.RefSeq.json`
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