Updated tests post-rebase

chanzuckerberg · Apr 30, 2024 · 4d4fb2b · 4d4fb2b
1 parent 07ae9d9
commit 4d4fb2b
Showing 1 changed file with 8 additions and 0 deletions.
diff --git a/cellxgene_schema_cli/tests/test_schema_compliance.py b/cellxgene_schema_cli/tests/test_schema_compliance.py
@@ -2029,12 +2029,20 @@ def test_obsm_values_spatial_embedding_missing__is_single_false(self, validator_
         validator = validator_with_visium_assay
         validator.adata.uns["spatial"] = {"is_single": False}
         del validator.adata.obsm["spatial"]
+        # Format adata.obs into valid shape for Visium and is_single False.
+        validator.adata.obs.pop("array_col")
+        validator.adata.obs.pop("array_row")
+        validator.adata.obs.pop("in_tissue")
         validator.validate_adata()
         assert validator.errors == []
 
     def test_obsm_values_spatial_embedding_present__is_single_false(self, validator_with_visium_assay):
         validator = validator_with_visium_assay
         validator.adata.uns["spatial"] = {"is_single": False}
+        # Format adata.obs into valid shape for Visium and is_single False.
+        validator.adata.obs.pop("array_col")
+        validator.adata.obs.pop("array_row")
+        validator.adata.obs.pop("in_tissue")
         validator.validate_adata()
         assert validator.errors == []