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  • Basel, Switzerland

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  1. sars-cov-2-eu-bdmm-prime sars-cov-2-eu-bdmm-prime Public

    A comprehensive study of the early phylodynamics of SARS-CoV-2 in Europe. Master's Thesis Project in the cEvo group at D-BSSE ETH Zurich. September 2020 to March 2021..

    Python

  2. BDMM-Prime BDMM-Prime Public

    Forked from tgvaughan/BDMM-Prime

    Modified implementation of the BDMM multi-type birth-death model for BEAST 2.

    Java

  3. cov-phydyn cov-phydyn Public template

    Template for SARS-CoV-2 MTBD phylodynamic analyses.

    Python

  4. GLMPrior GLMPrior Public

    Small implementation of a GLM Log Linear function for BEAST 2.

    Java 2 1

  5. talking-to-lapis talking-to-lapis Public

    Small functions to talk to LAPIS from R and python

    Python