v6.0.5 - Refseq out of range
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keiranmraine
Keiran Raine
Events close to start of contigs (<1kb) attempted to select from fasta file with negative values. This resolves this by setting min value of 1.
Errors like the following are the symptom:
Use of uninitialized value in uc at /.../bin/filter_with_microbes_and_remapping.pl line 216.
or
Use of uninitialized value in transliteration (tr///) at /.../bin/filter_with_microbes_and_remapping.pl line 529.