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Welcome to Astir

A cell type assignment algorithm for single cell multiplexed imaging and proteomic data.

Open In Colab

This repository stores a notebook containing a vignette to show you how to get started assigning cell types with Astir. To explore Astir's capabilities simply open the astir_tutorial.ipynb file in github and then click Open in Colab. This should open a new tap with a Google colab notebook that will guide you through an example.

The Astir repository is available here: https://github.com/camlab-bioml/astir

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