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Merge branch 'main' into fix_path_logic
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calebweinreb authored Apr 3, 2024
2 parents 570a97a + d3153e2 commit fa80094
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3 changes: 3 additions & 0 deletions README.md
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Expand Up @@ -17,6 +17,9 @@ conda create -n snub python=3.8
conda activate snub
pip install systems-neuro-browser
```

**Note: Python version 3.8 is required for Linux. For Windows and MacOS, any version ≥3.8 should work.**

To speed up selections, `pip install ncls`. To install optional developer dependencies, `pip install systems-neuro-browser[dev]`. The docs include more detailed [installation instructions](https://snub.readthedocs.io/en/latest/install.html).

## Getting Started
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2 changes: 1 addition & 1 deletion docs/source/index.rst
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@@ -1,7 +1,7 @@
SNUB (Systems Neuro Browser)
============================

reStructuredText:

.. image:: https://joss.theoj.org/papers/10.21105/joss.06187/status.svg
:target: https://doi.org/10.21105/joss.06187

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6 changes: 5 additions & 1 deletion docs/source/install.rst
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Expand Up @@ -2,13 +2,17 @@ Installation
============

Install Conda
----------------
-------------

Install `Anaconda <https://docs.anaconda.com/anaconda/install/index.html>`_ or `Miniconda <https://docs.conda.io/en/latest/miniconda.html>`_. Create and activate an environment called ``snub`` with python≥3.8::

conda create -n snub python=3.8
conda activate snub

.. note::
Python version 3.8 is required for Linux. For Windows and MacOS, any version ≥3.8 should work.



Install SNUB
------------
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5 changes: 3 additions & 2 deletions setup.cfg
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Expand Up @@ -12,7 +12,7 @@ classifiers =
[options]
packages = find:
include_package_data = True
python_requires = >=3.8, <3.9
python_requires = >=3.8
install_requires =
PyQt5
numpy
Expand All @@ -29,7 +29,8 @@ install_requires =
ipykernel
pyqtgraph
networkx
opencv-python==4.1.2.30
opencv-python; python_version > '3.8'
opencv-python==4.1.2.30; python_version == '3.8'
vidio>=0.0.3
pynwb
ndx-pose
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