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1. scTenifoldNet scTenifoldNet Public

   A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data

   R 21 4

2. scTenifoldKnk scTenifoldKnk Public

   R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.

   R 41 6

3. scTenifoldXct scTenifoldXct Public

   Manifold learning to detect cell-cell interactions.

   Jupyter Notebook 4 2

4. scTenifoldCko scTenifoldCko Public

   Python

5. QuantumGRN QuantumGRN Public

   Quantum Gene Regulatory Networks with Application to Single-cell Data

   Jupyter Notebook 17 9

6. QUBO_Feature_Selection QUBO_Feature_Selection Public

   Feature Selection QUBO (Quadratic Unconstrained Binary Optimization)

   MATLAB 2 4