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Replace deprecated or to be deprecated C-Python APIs #3

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Replace calls to Python's C API that are already deprecated in Python 3.12 and those that will be deprecated in Python 3.13:

I'm also working on updating
https://github.com/bytedeco/javacpp-presets/blob/a8de26c31a8f9065ac52a44bd500b1bbe0136caa/cpython/src/main/java/org/bytedeco/cpython/helper/python.java and depending on how the solution looks for that, this might also benefit from that change.
Therefore this is currently a draft.

Replace calls to Python's C API that are already deprecated in Python
3.12 and those that will be deprecated in Python 3.13:
- https://docs.python.org/3.13/whatsnew/3.13.html#removed-c-apis
- https://docs.python.org/3.13/whatsnew/3.13.html#deprecated-c-apis
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