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minor doc fix, platform unit does not relate to sample barcode
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bwlang committed Sep 9, 2023
1 parent e197ce4 commit b960886
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion src/main/scala/com/fulcrumgenomics/fastq/FastqToBam.scala
Original file line number Diff line number Diff line change
Expand Up @@ -97,7 +97,7 @@ class FastqToBam
@arg( doc="The name of the sequenced sample.") val sample: String,
@arg( doc="The name/ID of the sequenced library.") val library: String,
@arg( doc="Sequencing Platform.") val platform: String = "illumina",
@arg(doc="Platform unit (e.g. '<flowcell-barcode>.<lane>.<sample-barcode>')") val platformUnit: Option[String] = None,
@arg(doc="Platform unit (e.g. '<flowcell-barcode>.<lane>')") val platformUnit: Option[String] = None,
@arg(doc="Platform model to insert into the group header (ex. miseq, hiseq2500, hiseqX)") val platformModel: Option[String] = None,
@arg(doc="The sequencing center from which the data originated") val sequencingCenter: Option[String] = None,
@arg(doc="Predicted median insert size, to insert into the read group header") val predictedInsertSize: Option[Integer] = None,
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