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dev -> staging #1343

Merged
merged 8 commits into from
Jul 24, 2024
Merged

dev -> staging #1343

merged 8 commits into from
Jul 24, 2024

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nikellepetrillo
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Description

Give your PR a concise yet descriptive title.
Please explain the changes you made here.
Explain the motivation for making this change. What existing problem does the pull request solve?
Mention any issues fixed, addressed, or otherwise related to this pull request, including issue numbers or hard links for issues in other repos.
You can delete these instructions once you have written your PR description.


Checklist

If you can answer "yes" to the following items, please add a checkmark next to the appropriate checklist item(s) and notify our WARP documentation team by tagging either @ekiernan or @kayleemathews in a comment on this PR.

  • Did you add inputs, outputs, or tasks to a workflow?
  • Did you modify, delete or move: file paths, file names, input names, output names, or task names?
  • If you made a changelog update, did you update the pipeline version number?

ekiernan and others added 8 commits July 18, 2024 14:06
…m-docs

Removed WARP email from docs and replaced with link to WARP issues.
* move atac to its own dir

* changelogs

* changelogs

* changelogs

* Update pipelines/skylab/multiome/Multiome.changelog.md

Co-authored-by: ekiernan <[email protected]>

---------

Co-authored-by: ekiernan <[email protected]>
* remove pullapprove files
* remove some test files so tests will fail

* testing

* testing

* more testing

* missing inputs

* missing inputs

* add last output

* make inputs match dev

* use CompareCompressedTextFiles instead

* use CompareCompressedTextFiles instead

* revert

* removed inputs

* removed inputs

* new primer file

* new primer file

* new primer file

* new primer file

* exit 1

* exit 1

* exit 1

* make tests match develop

* update comparesams

* update comparesams

* update comparesams

* update comparesams

* update comparesams

* change iff

* change iff

* change iff

* change iff

* lenient_header

* lenient_header
* add cloud provider as input to slideseq

* add cloud provider as input to reblock

* add cloud provider as input to optimus

* add cloud provider as input to paired tag

---------

Co-authored-by: ekiernan <[email protected]>
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DO NOT SQUASH MERGE!!!

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🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/staging':
All changelog files are valid for this release.

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🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

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@aawdeh aawdeh left a comment

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LGTM

@nikellepetrillo nikellepetrillo merged commit 794bb5a into staging Jul 24, 2024
10 of 11 checks passed
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5 participants